Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 PAICSP7-201ENST00000419829 962 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 RPL21P43-201ENST00000425440 472 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AL358794.1-201ENST00000445689 381 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 RPL21P71-201ENST00000465598 459 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 PRDX3P4-201ENST00000470828 747 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 NDUFA5P9-201ENST00000472609 340 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 MTATP6P22-201ENST00000507369 598 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AC015795.1-201ENST00000513669 327 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 OR8G5-201ENST00000524943 1041 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AC096947.1-201ENST00000603233 470 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AL121652.1-201ENST00000608851 448 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 AC016597.2-201ENST00000613256 341 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 BMS1P21-201ENST00000634565 365 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 ERCC6-202ENST00000374127 1782 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AL355852.1-201ENST00000454081 1771 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 RNU1-108P-201ENST00000362556 161 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 OR1L1-202ENST00000373686 1083 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 MIR708-201ENST00000390708 88 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 ZNF602P-201ENST00000405929 924 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 SFR1P2-201ENST00000421841 730 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 MTCYBP42-201ENST00000444653 1130 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 RPL23AP43-201ENST00000446445 471 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 RPS23P7-201ENST00000466210 444 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AC053481.1-201ENST00000467217 306 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 RN7SL41P-201ENST00000476144 297 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AC096571.1-202ENST00000506634 735 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 HPRT1P1-201ENST00000509498 657 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 TPT1P8-201ENST00000510120 555 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 OR5H4P-201ENST00000510851 923 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 SOD1P3-201ENST00000518682 454 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AC004217.3-201ENST00000551552 878 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AC022069.1-201ENST00000582910 658 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 SLC25A36P1-201ENST00000590111 465 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AC090948.1-201ENST00000607464 549 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AL359535.1-201ENST00000612100 1087 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AC083809.1-201ENST00000615051 472 ntBASIC4.73□□□□□ -1.65
SNX30Q5VWJ9 AC105227.2-201ENST00000615075 605 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms