Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 AC092354.2-201ENST00000607786 514 ntBASIC4.42□□□□□ -1.7
RFX7Q2KHR2 AC092111.2-201ENST00000611627 1414 ntBASIC4.42□□□□□ -1.7
RFX7Q2KHR2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 GCNT6-201ENST00000379591 934 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 MIR490-201ENST00000384865 128 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 PTP4A1P1-201ENST00000420539 515 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 SDCBPP2-201ENST00000424643 885 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 AC092641.1-201ENST00000440229 772 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 AC005229.2-201ENST00000456995 399 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 APOOP2-201ENST00000461561 539 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 RPL23AP12-201ENST00000467573 473 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 WBP1LP4-201ENST00000505043 344 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 NARSP2-201ENST00000518524 679 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 TRAV15-201ENST00000556680 249 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 AC007342.8-201ENST00000623278 678 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 AC243312.2-201ENST00000623340 601 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 MFSD8-233ENST00000641482 4860 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 OR6C71P-202ENST00000641886 1107 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 CR381670.1-201ENST00000624291 1693 ntBASIC4.41□□□□□ -1.7
RFX7Q2KHR2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFX7Q2KHR2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RFX7Q2KHR2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
RFX7Q2KHR2 RPL7P4-203ENST00000430239 730 ntBASIC4.4□□□□□ -1.7
RFX7Q2KHR2 AL645931.1-201ENST00000439737 410 ntBASIC4.4□□□□□ -1.7
RFX7Q2KHR2 OR52Y1P-201ENST00000452418 828 ntBASIC4.4□□□□□ -1.7
RFX7Q2KHR2 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RFX7Q2KHR2 AP006245.1-201ENST00000522549 120 ntBASIC4.4□□□□□ -1.7
RFX7Q2KHR2 AP000926.4-201ENST00000527351 454 ntBASIC4.4□□□□□ -1.7
RFX7Q2KHR2 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.4□□□□□ -1.7
RFX7Q2KHR2 AC093014.1-201ENST00000548926 724 ntBASIC4.4□□□□□ -1.7
RFX7Q2KHR2 AC020914.4-201ENST00000597690 277 ntBASIC4.4□□□□□ -1.7
RFX7Q2KHR2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.4□□□□□ -1.7
RFX7Q2KHR2 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.4□□□□□ -1.7
RFX7Q2KHR2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RFX7Q2KHR2 CEP170P1-201ENST00000502249 4587 ntBASIC4.4□□□□□ -1.7
RFX7Q2KHR2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 PRO1804-201ENST00000623780 2050 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 MIR34B-201ENST00000385076 84 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 SAGE2P-201ENST00000420011 2126 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 ATP5JP1-201ENST00000431631 322 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 AC010655.1-201ENST00000449336 292 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 RBMY2UP-201ENST00000453474 324 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 AC007967.1-201ENST00000455422 1159 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 AL133477.1-201ENST00000457472 514 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 SNORD105B-201ENST00000458770 79 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 RN7SL809P-201ENST00000482040 297 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 SETP14-201ENST00000497538 873 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 MTCYBP19-201ENST00000517463 1124 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 OR8I1P-201ENST00000529291 931 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 OR5B10P-201ENST00000532869 642 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 AL392088.2-201ENST00000637607 285 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 AL732372.2-225ENST00000642124 456 ntBASIC4.4□□□□□ -1.71
RFX7Q2KHR2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX7Q2KHR2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms