Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.41□□□□□ -1.7
CACNA1SQ13698 AL121594.4-201ENST00000556211 1196 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 MIR5680-201ENST00000577577 84 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.41□□□□□ -1.7
CACNA1SQ13698 AC093775.1-201ENST00000624154 1868 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CACNA1SQ13698 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CACNA1SQ13698 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
CACNA1SQ13698 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
CACNA1SQ13698 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CACNA1SQ13698 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CACNA1SQ13698 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CACNA1SQ13698 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.41□□□□□ -1.7
CACNA1SQ13698 RPL26P28-201ENST00000451325 435 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 AC010469.1-201ENST00000463864 576 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 TRBV12-2-201ENST00000489763 344 ntBASIC4.41□□□□□ -1.7
CACNA1SQ13698 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CACNA1SQ13698 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.41□□□□□ -1.7
CACNA1SQ13698 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CACNA1SQ13698 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CACNA1SQ13698 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.4□□□□□ -1.7
CACNA1SQ13698 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.4□□□□□ -1.7
CACNA1SQ13698 AC007529.1-201ENST00000418574 2178 ntBASIC4.4□□□□□ -1.7
CACNA1SQ13698 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.4□□□□□ -1.7
CACNA1SQ13698 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CACNA1SQ13698 AC090337.1-201ENST00000579651 2074 ntBASIC4.4□□□□□ -1.71
CACNA1SQ13698 HLFP1-201ENST00000402375 499 ntBASIC4.4□□□□□ -1.71
CACNA1SQ13698 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.4□□□□□ -1.71
CACNA1SQ13698 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.4□□□□□ -1.71
CACNA1SQ13698 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.4□□□□□ -1.71
CACNA1SQ13698 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.4□□□□□ -1.71
CACNA1SQ13698 AC000041.1-201ENST00000439655 175 ntBASIC4.4□□□□□ -1.71
CACNA1SQ13698 AL831737.1-201ENST00000441288 271 ntBASIC4.4□□□□□ -1.71
CACNA1SQ13698 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.4□□□□□ -1.71
CACNA1SQ13698 AC109925.1-201ENST00000478069 331 ntBASIC4.4□□□□□ -1.71
CACNA1SQ13698 FTH1P24-201ENST00000503502 462 ntBASIC4.4□□□□□ -1.71
CACNA1SQ13698 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.4□□□□□ -1.71
CACNA1SQ13698 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.4□□□□□ -1.71
CACNA1SQ13698 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.4□□□□□ -1.71
CACNA1SQ13698 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.4□□□□□ -1.71
CACNA1SQ13698 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.4□□□□□ -1.71
CACNA1SQ13698 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.4□□□□□ -1.71
CACNA1SQ13698 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.4□□□□□ -1.71
CACNA1SQ13698 AC006116.10-201ENST00000591836 581 ntBASIC4.4□□□□□ -1.71
CACNA1SQ13698 AC015813.4-201ENST00000610469 179 ntBASIC4.4□□□□□ -1.71
CACNA1SQ13698 AC127502.3-201ENST00000636170 1206 ntBASIC4.4□□□□□ -1.71
CACNA1SQ13698 THAP12P8-201ENST00000447914 2115 ntBASIC4.4□□□□□ -1.71
CACNA1SQ13698 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CACNA1SQ13698 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
CACNA1SQ13698 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CACNA1SQ13698 AC139713.2-215ENST00000641428 5037 ntBASIC4.39□□□□□ -1.71
CACNA1SQ13698 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CACNA1SQ13698 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CACNA1SQ13698 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CACNA1SQ13698 SNORA79B-201ENST00000410557 148 ntBASIC4.39□□□□□ -1.71
CACNA1SQ13698 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 AC002553.2-201ENST00000453217 340 ntBASIC4.39□□□□□ -1.71
CACNA1SQ13698 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 SNORD105B-201ENST00000458770 79 ntBASIC4.39□□□□□ -1.71
CACNA1SQ13698 AC037198.2-201ENST00000478845 733 ntBASIC4.39□□□□□ -1.71
CACNA1SQ13698 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CACNA1SQ13698 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 AC011611.1-201ENST00000552179 197 ntBASIC4.39□□□□□ -1.71
CACNA1SQ13698 AL133457.1-201ENST00000564251 987 ntBASIC4.39□□□□□ -1.71
CACNA1SQ13698 CKS1BP3-201ENST00000600888 237 ntBASIC4.39□□□□□ -1.71
CACNA1SQ13698 AL606834.2-201ENST00000602954 668 ntBASIC4.39□□□□□ -1.71
CACNA1SQ13698 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CACNA1SQ13698 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 AC073587.1-201ENST00000447093 876 ntBASIC4.39□□□□□ -1.71
CACNA1SQ13698 AC006480.1-201ENST00000449887 378 ntBASIC4.39□□□□□ -1.71
CACNA1SQ13698 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 YPEL5P2-201ENST00000605553 359 ntBASIC4.39□□□□□ -1.71
CACNA1SQ13698 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.39□□□□□ -1.71
CACNA1SQ13698 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CACNA1SQ13698 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.38□□□□□ -1.71
CACNA1SQ13698 AL022322.2-201ENST00000624072 20397 ntBASIC4.38□□□□□ -1.71
CACNA1SQ13698 USP8P1-201ENST00000494673 3183 ntBASIC4.38□□□□□ -1.71
CACNA1SQ13698 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CACNA1SQ13698 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CACNA1SQ13698 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CACNA1SQ13698 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CACNA1SQ13698 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CACNA1SQ13698 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CACNA1SQ13698 AL691447.1-201ENST00000419456 387 ntBASIC4.38□□□□□ -1.71
CACNA1SQ13698 RPL21P109-201ENST00000422213 475 ntBASIC4.38□□□□□ -1.71
CACNA1SQ13698 SDCBPP2-201ENST00000424643 885 ntBASIC4.38□□□□□ -1.71
CACNA1SQ13698 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.38□□□□□ -1.71
CACNA1SQ13698 AC092809.1-201ENST00000441469 474 ntBASIC4.38□□□□□ -1.71
CACNA1SQ13698 TMED11P-201ENST00000479478 690 ntBASIC4.38□□□□□ -1.71
CACNA1SQ13698 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms