Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC091167.1-201ENST00000492017 396 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 RPL30P11-201ENST00000495304 339 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AC113420.1-201ENST00000507903 571 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 PRELID3BP5-201ENST00000508612 460 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AC008885.2-201ENST00000509506 930 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 RPL7L1P13-201ENST00000511702 739 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK3Q00526 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK3Q00526 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK3Q00526 OR10V3P-201ENST00000525712 725 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK3Q00526 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.31□□□□□ -1.72
CDK3Q00526 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK3Q00526 AC136624.4-201ENST00000573044 370 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 BPTFP1-201ENST00000579209 492 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AC069304.3-201ENST00000603938 1084 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AC091488.1-201ENST00000604239 660 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 ARF4P1-201ENST00000605447 541 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AL583856.2-201ENST00000606298 543 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 Z98200.1-201ENST00000607298 470 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AP000238.1-201ENST00000608759 426 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 AL021997.2-201ENST00000615674 271 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.31□□□□□ -1.72
CDK3Q00526 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.31□□□□□ -1.72
CDK3Q00526 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDK3Q00526 AL158163.1-201ENST00000603915 1649 ntBASIC4.31□□□□□ -1.72
CDK3Q00526 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 AC126323.6-202ENST00000568092 3511 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.3□□□□□ -1.72
CDK3Q00526 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.3□□□□□ -1.72
CDK3Q00526 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 ZNF29P-201ENST00000225587 168 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDK3Q00526 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDK3Q00526 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDK3Q00526 RNU1-44P-201ENST00000384453 163 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 SNORD96B-201ENST00000386148 79 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 AL583835.1-201ENST00000399570 407 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CDK3Q00526 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.3□□□□□ -1.72
CDK3Q00526 MTCO2P31-201ENST00000402702 684 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 PRELID3BP11-201ENST00000414230 479 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.3□□□□□ -1.72
CDK3Q00526 AC027644.1-201ENST00000419595 298 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 GTF2IP2-201ENST00000424290 697 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.3□□□□□ -1.72
CDK3Q00526 RSL24D1P6-201ENST00000426934 401 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 RPEP2-201ENST00000432149 701 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 RPL37P1-201ENST00000432310 284 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.3□□□□□ -1.72
CDK3Q00526 MTCYBP42-201ENST00000444653 1130 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.3□□□□□ -1.72
CDK3Q00526 AC096992.1-201ENST00000459808 709 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 UQCRHP4-201ENST00000471686 272 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 RPL23AP65-201ENST00000475608 468 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 AC041039.1-201ENST00000485656 536 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CDK3Q00526 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.3□□□□□ -1.72
CDK3Q00526 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.3□□□□□ -1.72
CDK3Q00526 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.3□□□□□ -1.72
CDK3Q00526 AC118282.2-201ENST00000508739 374 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.3□□□□□ -1.72
CDK3Q00526 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.3□□□□□ -1.72
CDK3Q00526 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.3□□□□□ -1.72
CDK3Q00526 MTCO3P15-201ENST00000526563 574 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 OR4A2P-201ENST00000527276 913 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 CYCSP28-201ENST00000534284 321 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.3□□□□□ -1.72
CDK3Q00526 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.3□□□□□ -1.72
CDK3Q00526 RPP40P2-201ENST00000603596 712 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 AL354984.3-201ENST00000604803 325 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 AC090948.2-201ENST00000607363 564 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 AL445567.2-201ENST00000618935 498 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 AC123767.1-202ENST00000620407 817 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 AC005086.4-201ENST00000623065 213 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.3□□□□□ -1.72
CDK3Q00526 FP325313.1-201ENST00000638228 703 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CDK3Q00526 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 AC090971.4-201ENST00000560291 1800 ntBASIC4.3□□□□□ -1.72
CDK3Q00526 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.3□□□□□ -1.72
CDK3Q00526 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms