Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.51□□□□□ -1.69
CCNA1P78396 AC133473.1-201ENST00000455173 299 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 snoU13.24-201ENST00000458998 104 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 ATG10-AS1-201ENST00000504846 648 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 MTCO3P42-201ENST00000509488 518 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 AC026726.1-201ENST00000512859 601 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.51□□□□□ -1.69
CCNA1P78396 MTCO3P39-201ENST00000514812 518 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.51□□□□□ -1.69
CCNA1P78396 AC067904.2-201ENST00000517322 1283 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 AC008694.2-201ENST00000517591 306 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 MTND1P6-201ENST00000523621 946 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 AC100770.1-201ENST00000532310 322 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.51□□□□□ -1.69
CCNA1P78396 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.51□□□□□ -1.69
CCNA1P78396 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCNA1P78396 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.51□□□□□ -1.69
CCNA1P78396 AC017100.2-201ENST00000584628 355 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.51□□□□□ -1.69
CCNA1P78396 AL049634.3-201ENST00000604968 457 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 AC064801.1-201ENST00000612025 407 ntBASIC4.51□□□□□ -1.69
CCNA1P78396 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCNA1P78396 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CCNA1P78396 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.5□□□□□ -1.69
CCNA1P78396 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCNA1P78396 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CCNA1P78396 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCNA1P78396 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.5□□□□□ -1.69
CCNA1P78396 RNU6-670P-201ENST00000364312 104 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCNA1P78396 U1.1-201ENST00000384101 164 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCNA1P78396 RNA5SP239-201ENST00000410218 129 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.5□□□□□ -1.69
CCNA1P78396 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.5□□□□□ -1.69
CCNA1P78396 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.5□□□□□ -1.69
CCNA1P78396 KRR1P1-201ENST00000419430 803 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 PDSS1P1-201ENST00000422953 1114 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCNA1P78396 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCNA1P78396 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.5□□□□□ -1.69
CCNA1P78396 RPS24P8-201ENST00000431490 402 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 AC007563.3-201ENST00000433233 371 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 BTG3P1-201ENST00000435859 716 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 AC073587.1-201ENST00000447093 876 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 AC104306.1-201ENST00000449702 371 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.5□□□□□ -1.69
CCNA1P78396 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.5□□□□□ -1.69
CCNA1P78396 UBE2CP3-201ENST00000502715 450 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.5□□□□□ -1.69
CCNA1P78396 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.5□□□□□ -1.69
CCNA1P78396 IGKV2D-19-201ENST00000523346 262 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.5□□□□□ -1.69
CCNA1P78396 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.5□□□□□ -1.69
CCNA1P78396 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.5□□□□□ -1.69
CCNA1P78396 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.5□□□□□ -1.69
CCNA1P78396 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.5□□□□□ -1.69
CCNA1P78396 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CCNA1P78396 AL161756.2-201ENST00000604597 246 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 AC007179.3-201ENST00000604976 235 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 AC015967.1-201ENST00000619893 476 ntBASIC4.5□□□□□ -1.69
CCNA1P78396 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
CCNA1P78396 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCNA1P78396 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCNA1P78396 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CCNA1P78396 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCNA1P78396 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.49□□□□□ -1.69
CCNA1P78396 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.49□□□□□ -1.69
CCNA1P78396 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCNA1P78396 MIR34B-201ENST00000385076 84 ntBASIC4.49□□□□□ -1.69
CCNA1P78396 HDGFP1-201ENST00000405943 252 ntBASIC4.49□□□□□ -1.69
CCNA1P78396 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCNA1P78396 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.49□□□□□ -1.69
CCNA1P78396 SKP1P3-201ENST00000429280 487 ntBASIC4.49□□□□□ -1.69
CCNA1P78396 HMGN2P31-201ENST00000432430 273 ntBASIC4.49□□□□□ -1.69
CCNA1P78396 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCNA1P78396 RPS3AP12-201ENST00000443616 753 ntBASIC4.49□□□□□ -1.69
CCNA1P78396 AC005008.1-201ENST00000456151 612 ntBASIC4.49□□□□□ -1.69
CCNA1P78396 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.49□□□□□ -1.69
CCNA1P78396 AL133162.1-201ENST00000463228 453 ntBASIC4.49□□□□□ -1.69
CCNA1P78396 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.49□□□□□ -1.69
CCNA1P78396 RNA5SP164-201ENST00000516533 110 ntBASIC4.49□□□□□ -1.69
CCNA1P78396 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.49□□□□□ -1.69
CCNA1P78396 OR8I1P-201ENST00000529291 931 ntBASIC4.49□□□□□ -1.69
CCNA1P78396 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.49□□□□□ -1.69
CCNA1P78396 AP003072.4-201ENST00000624580 310 ntBASIC4.49□□□□□ -1.69
CCNA1P78396 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCNA1P78396 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCNA1P78396 RNF6P1-201ENST00000444889 1784 ntBASIC4.49□□□□□ -1.69
CCNA1P78396 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCNA1P78396 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
CCNA1P78396 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCNA1P78396 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.48□□□□□ -1.69
CCNA1P78396 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.48□□□□□ -1.69
CCNA1P78396 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCNA1P78396 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCNA1P78396 RNA5SP502-201ENST00000362694 119 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCNA1P78396 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.48□□□□□ -1.69
CCNA1P78396 RPL23AP48-201ENST00000406913 488 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms