Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDL3P58872 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
RHBDL3P58872 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDL3P58872 AC025031.4-201ENST00000621248 3271 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RHBDL3P58872 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDL3P58872 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDL3P58872 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDL3P58872 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDL3P58872 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDL3P58872 RNU6-582P-201ENST00000362989 107 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 RNU6-1066P-201ENST00000363573 105 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 SNORD116-23-201ENST00000384645 92 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.45□□□□□ -1.54
RHBDL3P58872 RPL31P2-201ENST00000413849 377 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 AL449283.1-202ENST00000418249 604 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDL3P58872 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.45□□□□□ -1.54
RHBDL3P58872 MTCO1P54-201ENST00000430139 712 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.45□□□□□ -1.54
RHBDL3P58872 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDL3P58872 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.45□□□□□ -1.54
RHBDL3P58872 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.45□□□□□ -1.54
RHBDL3P58872 AL645638.1-201ENST00000440519 361 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 Z77249.1-201ENST00000444622 1175 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDL3P58872 AL034418.1-201ENST00000448675 860 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 AC010618.1-201ENST00000469924 477 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.45□□□□□ -1.54
RHBDL3P58872 AC093840.1-201ENST00000511599 336 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDL3P58872 AC104057.1-201ENST00000515547 497 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 RNA5SP464-201ENST00000516251 108 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.45□□□□□ -1.54
RHBDL3P58872 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.45□□□□□ -1.54
RHBDL3P58872 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.45□□□□□ -1.54
RHBDL3P58872 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDL3P58872 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.45□□□□□ -1.54
RHBDL3P58872 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.45□□□□□ -1.54
RHBDL3P58872 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.45□□□□□ -1.54
RHBDL3P58872 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.45□□□□□ -1.54
RHBDL3P58872 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDL3P58872 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDL3P58872 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDL3P58872 MIR3138-201ENST00000585238 82 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.45□□□□□ -1.54
RHBDL3P58872 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.45□□□□□ -1.54
RHBDL3P58872 AC020910.2-201ENST00000603635 610 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 AC010680.3-201ENST00000604215 520 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 IMMP1LP1-201ENST00000605170 488 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.45□□□□□ -1.54
RHBDL3P58872 AL023881.1-201ENST00000621088 301 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDL3P58872 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.45□□□□□ -1.54
RHBDL3P58872 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RHBDL3P58872 AC104623.2-202ENST00000623477 4002 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 AL355578.1-201ENST00000607405 1328 ntBASIC5.45□□□□□ -1.54
RHBDL3P58872 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDL3P58872 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDL3P58872 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RHBDL3P58872 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RHBDL3P58872 SALL4P2-201ENST00000423288 2910 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDL3P58872 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
RHBDL3P58872 PNPT1P2-201ENST00000456768 2050 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDL3P58872 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDL3P58872 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.44□□□□□ -1.54
RHBDL3P58872 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RHBDL3P58872 RNU1-130P-201ENST00000363930 160 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 RNU6-707P-201ENST00000364647 95 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 RNU6-356P-201ENST00000384140 107 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 RNU6-441P-201ENST00000384545 106 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDL3P58872 AL133264.1-201ENST00000407157 562 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 MIR1250-201ENST00000408098 113 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.44□□□□□ -1.54
RHBDL3P58872 MTND2P9-201ENST00000422293 931 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.44□□□□□ -1.54
RHBDL3P58872 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.44□□□□□ -1.54
RHBDL3P58872 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.44□□□□□ -1.54
RHBDL3P58872 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.44□□□□□ -1.54
RHBDL3P58872 DHX9P1-201ENST00000436565 3076 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 AC241584.1-201ENST00000438469 1241 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.44□□□□□ -1.54
RHBDL3P58872 AC004854.1-201ENST00000440356 349 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 EXOSC3P1-201ENST00000448649 500 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RHBDL3P58872 NUTF2P7-201ENST00000453086 375 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 PNPLA4P1-201ENST00000458328 305 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 AC146507.1-201ENST00000468335 354 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 AC068587.1-201ENST00000483613 781 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.44□□□□□ -1.54
RHBDL3P58872 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.44□□□□□ -1.54
RHBDL3P58872 AC113347.3-201ENST00000509113 148 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 RNA5SP249-201ENST00000516127 99 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 RNU6-885P-201ENST00000516607 104 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 IGLVIV-65-201ENST00000517313 360 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 MTND1P6-201ENST00000523621 946 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 AC023575.1-201ENST00000580510 358 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms