Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC138649.3-201ENST00000622154 254 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AC132068.1-201ENST00000623805 459 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 CU639417.4-201ENST00000623928 207 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AC019226.1-201ENST00000625666 515 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 ELF2P3-201ENST00000445099 1506 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CLRN1P58418 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.85□□□□□ -1.63
CLRN1P58418 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLRN1P58418 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.84□□□□□ -1.63
CLRN1P58418 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLRN1P58418 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 AC008079.2-201ENST00000623543 20396 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLRN1P58418 RNA5SP319-201ENST00000362768 119 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 RNU6-984P-201ENST00000363236 109 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 RNU6-777P-201ENST00000364265 104 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 MIR92A2-201ENST00000385299 75 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CLRN1P58418 RAP1BP3-201ENST00000407180 549 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.84□□□□□ -1.63
CLRN1P58418 RN7SKP286-201ENST00000410894 299 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.84□□□□□ -1.63
CLRN1P58418 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 USP9YP18-201ENST00000425912 695 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.84□□□□□ -1.63
CLRN1P58418 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.84□□□□□ -1.63
CLRN1P58418 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.84□□□□□ -1.63
CLRN1P58418 RPL12P17-201ENST00000432393 498 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 LSM1P1-201ENST00000438629 273 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC122718.1-201ENST00000439448 744 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 AC019185.1-201ENST00000442718 389 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.84□□□□□ -1.63
CLRN1P58418 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.84□□□□□ -1.63
CLRN1P58418 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.84□□□□□ -1.63
CLRN1P58418 HMGN1P36-201ENST00000446623 298 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.84□□□□□ -1.63
CLRN1P58418 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.84□□□□□ -1.63
CLRN1P58418 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 snoU109.1-201ENST00000459339 135 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 FAM133DP-201ENST00000464802 691 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC092754.1-201ENST00000472975 479 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC010301.1-201ENST00000473936 355 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC017015.1-201ENST00000477387 286 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC109462.1-201ENST00000491087 368 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 POU5F1P7-201ENST00000508759 541 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.84□□□□□ -1.63
CLRN1P58418 NDUFB4P2-201ENST00000509515 391 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC022483.1-201ENST00000514020 567 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 RN7SKP96-201ENST00000516948 297 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CLRN1P58418 SOD1P3-201ENST00000518682 454 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.84□□□□□ -1.63
CLRN1P58418 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.84□□□□□ -1.63
CLRN1P58418 MTND4LP18-201ENST00000526864 291 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLRN1P58418 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.84□□□□□ -1.63
CLRN1P58418 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.84□□□□□ -1.63
CLRN1P58418 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.84□□□□□ -1.63
CLRN1P58418 AC027544.3-201ENST00000535082 757 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 AC137800.2-201ENST00000574375 120 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 MIR548S-201ENST00000581352 82 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.84□□□□□ -1.63
CLRN1P58418 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.84□□□□□ -1.63
CLRN1P58418 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.84□□□□□ -1.63
CLRN1P58418 AC015982.1-201ENST00000608113 465 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AL159169.3-201ENST00000608871 561 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 Z95327.3-201ENST00000610385 572 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC008250.2-201ENST00000615261 205 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AL139089.1-201ENST00000620372 975 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC127024.6-201ENST00000621598 424 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AL691477.1-201ENST00000624398 162 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 AL157786.1-207ENST00000627771 695 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 AC099654.13-201ENST00000639774 207 ntBASIC4.84□□□□□ -1.63
CLRN1P58418 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLRN1P58418 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
CLRN1P58418 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLRN1P58418 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms