Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.74□□□□□ -1.81
VSX2P58304 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX2P58304 NDUFA5P10-201ENST00000432147 357 ntBASIC3.74□□□□□ -1.81
VSX2P58304 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX2P58304 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.74□□□□□ -1.81
VSX2P58304 HMGB1P37-201ENST00000439613 609 ntBASIC3.74□□□□□ -1.81
VSX2P58304 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX2P58304 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.74□□□□□ -1.81
VSX2P58304 RN7SL323P-201ENST00000494712 295 ntBASIC3.74□□□□□ -1.81
VSX2P58304 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
VSX2P58304 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX2P58304 RNU6-751P-201ENST00000516382 101 ntBASIC3.74□□□□□ -1.81
VSX2P58304 NDUFA5P2-201ENST00000519723 344 ntBASIC3.74□□□□□ -1.81
VSX2P58304 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.74□□□□□ -1.81
VSX2P58304 MED28P5-201ENST00000528254 438 ntBASIC3.74□□□□□ -1.81
VSX2P58304 OR4A12P-201ENST00000530847 918 ntBASIC3.74□□□□□ -1.81
VSX2P58304 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX2P58304 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX2P58304 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX2P58304 NPM1P47-201ENST00000560843 856 ntBASIC3.74□□□□□ -1.81
VSX2P58304 AC034105.4-201ENST00000568304 277 ntBASIC3.74□□□□□ -1.81
VSX2P58304 MIR5685-201ENST00000579080 79 ntBASIC3.74□□□□□ -1.81
VSX2P58304 VN1R79P-201ENST00000593540 513 ntBASIC3.74□□□□□ -1.81
VSX2P58304 AC010680.3-201ENST00000604215 520 ntBASIC3.74□□□□□ -1.81
VSX2P58304 AC090912.3-201ENST00000609775 533 ntBASIC3.74□□□□□ -1.81
VSX2P58304 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX2P58304 AC116447.1-201ENST00000613153 453 ntBASIC3.74□□□□□ -1.81
VSX2P58304 AL354798.1-201ENST00000622505 329 ntBASIC3.74□□□□□ -1.81
VSX2P58304 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
VSX2P58304 CASC19-284ENST00000642142 1868 ntBASIC3.74□□□□□ -1.81
VSX2P58304 ASNSP1-204ENST00000641977 1664 ntBASIC3.74□□□□□ -1.81
VSX2P58304 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VSX2P58304 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
VSX2P58304 AC106871.1-201ENST00000568324 3102 ntBASIC3.73□□□□□ -1.81
VSX2P58304 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.73□□□□□ -1.81
VSX2P58304 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.73□□□□□ -1.81
VSX2P58304 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VSX2P58304 RNU1-85P-201ENST00000364127 164 ntBASIC3.73□□□□□ -1.81
VSX2P58304 SNORA62.2-201ENST00000364672 152 ntBASIC3.73□□□□□ -1.81
VSX2P58304 GSTA12P-201ENST00000402398 508 ntBASIC3.73□□□□□ -1.81
VSX2P58304 RN7SKP177-201ENST00000410567 355 ntBASIC3.73□□□□□ -1.81
VSX2P58304 RPL7P53-201ENST00000421245 739 ntBASIC3.73□□□□□ -1.81
VSX2P58304 RPL7P4-203ENST00000430239 730 ntBASIC3.73□□□□□ -1.81
VSX2P58304 FTH1P6-201ENST00000430768 320 ntBASIC3.73□□□□□ -1.81
VSX2P58304 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.73□□□□□ -1.81
VSX2P58304 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.73□□□□□ -1.81
VSX2P58304 AF228730.2-201ENST00000438784 848 ntBASIC3.73□□□□□ -1.81
VSX2P58304 AC083863.1-201ENST00000438811 231 ntBASIC3.73□□□□□ -1.81
VSX2P58304 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VSX2P58304 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.73□□□□□ -1.81
VSX2P58304 AC239809.1-201ENST00000450470 217 ntBASIC3.73□□□□□ -1.81
VSX2P58304 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.73□□□□□ -1.81
VSX2P58304 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.73□□□□□ -1.81
VSX2P58304 RPL21P71-201ENST00000465598 459 ntBASIC3.73□□□□□ -1.81
VSX2P58304 AP000926.1-201ENST00000479573 241 ntBASIC3.73□□□□□ -1.81
VSX2P58304 METTL15P1-201ENST00000481421 1045 ntBASIC3.73□□□□□ -1.81
VSX2P58304 AC092045.1-201ENST00000495716 1231 ntBASIC3.73□□□□□ -1.81
VSX2P58304 AL139099.1-201ENST00000497398 403 ntBASIC3.73□□□□□ -1.81
VSX2P58304 AC020593.1-201ENST00000507399 299 ntBASIC3.73□□□□□ -1.81
VSX2P58304 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.73□□□□□ -1.81
VSX2P58304 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VSX2P58304 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.73□□□□□ -1.81
VSX2P58304 SNORD116-26-201ENST00000516006 96 ntBASIC3.73□□□□□ -1.81
VSX2P58304 RNU6-1308P-201ENST00000516817 103 ntBASIC3.73□□□□□ -1.81
VSX2P58304 AC087369.1-201ENST00000520775 996 ntBASIC3.73□□□□□ -1.81
VSX2P58304 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.73□□□□□ -1.81
VSX2P58304 AC092851.1-201ENST00000535964 478 ntBASIC3.73□□□□□ -1.81
VSX2P58304 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.73□□□□□ -1.81
VSX2P58304 AC068714.1-201ENST00000559623 800 ntBASIC3.73□□□□□ -1.81
VSX2P58304 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.73□□□□□ -1.81
VSX2P58304 HSPE1P5-201ENST00000561489 272 ntBASIC3.73□□□□□ -1.81
VSX2P58304 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.73□□□□□ -1.81
VSX2P58304 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.73□□□□□ -1.81
VSX2P58304 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.73□□□□□ -1.81
VSX2P58304 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.73□□□□□ -1.81
VSX2P58304 AL391834.1-201ENST00000609609 560 ntBASIC3.73□□□□□ -1.81
VSX2P58304 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.73□□□□□ -1.81
VSX2P58304 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.73□□□□□ -1.81
VSX2P58304 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VSX2P58304 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
VSX2P58304 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VSX2P58304 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VSX2P58304 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
VSX2P58304 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.73□□□□□ -1.81
VSX2P58304 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VSX2P58304 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VSX2P58304 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
VSX2P58304 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
VSX2P58304 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VSX2P58304 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VSX2P58304 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VSX2P58304 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
VSX2P58304 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VSX2P58304 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.72□□□□□ -1.81
VSX2P58304 MIR30B-201ENST00000384850 88 ntBASIC3.72□□□□□ -1.81
VSX2P58304 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VSX2P58304 RN7SKP56-201ENST00000410513 331 ntBASIC3.72□□□□□ -1.81
VSX2P58304 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.72□□□□□ -1.81
VSX2P58304 TCEA1P4-201ENST00000415066 844 ntBASIC3.72□□□□□ -1.81
VSX2P58304 BTF3P9-201ENST00000418784 283 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms