Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PEX3P56589 OR4A12P-201ENST00000530847 918 ntBASIC4.31□□□□□ -1.72
PEX3P56589 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.31□□□□□ -1.72
PEX3P56589 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 HMGB3P26-201ENST00000560051 582 ntBASIC4.31□□□□□ -1.72
PEX3P56589 NPM1P47-201ENST00000560843 856 ntBASIC4.31□□□□□ -1.72
PEX3P56589 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 AC106785.3-201ENST00000564064 847 ntBASIC4.31□□□□□ -1.72
PEX3P56589 CD24P2-201ENST00000565486 219 ntBASIC4.31□□□□□ -1.72
PEX3P56589 AC106785.1-201ENST00000565935 262 ntBASIC4.31□□□□□ -1.72
PEX3P56589 TMF1P1-201ENST00000576058 373 ntBASIC4.31□□□□□ -1.72
PEX3P56589 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.31□□□□□ -1.72
PEX3P56589 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PEX3P56589 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.31□□□□□ -1.72
PEX3P56589 AC128687.2-201ENST00000609657 566 ntBASIC4.31□□□□□ -1.72
PEX3P56589 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PEX3P56589 CDRT1-208ENST00000630868 794 ntBASIC4.31□□□□□ -1.72
PEX3P56589 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.31□□□□□ -1.72
PEX3P56589 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PEX3P56589 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PEX3P56589 PNPT1P2-201ENST00000456768 2050 ntBASIC4.31□□□□□ -1.72
PEX3P56589 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PEX3P56589 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PEX3P56589 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PEX3P56589 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.31□□□□□ -1.72
PEX3P56589 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PEX3P56589 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PEX3P56589 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PEX3P56589 AL133412.1-201ENST00000380194 2992 ntBASIC4.3□□□□□ -1.72
PEX3P56589 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
PEX3P56589 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PEX3P56589 Y_RNA.126-201ENST00000363382 111 ntBASIC4.3□□□□□ -1.72
PEX3P56589 TAF9BP2-201ENST00000400856 499 ntBASIC4.3□□□□□ -1.72
PEX3P56589 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.3□□□□□ -1.72
PEX3P56589 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.3□□□□□ -1.72
PEX3P56589 KCTD9P3-201ENST00000434597 1169 ntBASIC4.3□□□□□ -1.72
PEX3P56589 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PEX3P56589 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.3□□□□□ -1.72
PEX3P56589 AL451050.1-201ENST00000450126 415 ntBASIC4.3□□□□□ -1.72
PEX3P56589 RPL23AP23-201ENST00000452590 471 ntBASIC4.3□□□□□ -1.72
PEX3P56589 AL672167.3-201ENST00000465951 960 ntBASIC4.3□□□□□ -1.72
PEX3P56589 AC020898.1-201ENST00000474167 787 ntBASIC4.3□□□□□ -1.72
PEX3P56589 AC025459.1-201ENST00000504072 156 ntBASIC4.3□□□□□ -1.72
PEX3P56589 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.3□□□□□ -1.72
PEX3P56589 RNU6-352P-201ENST00000516908 107 ntBASIC4.3□□□□□ -1.72
PEX3P56589 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.3□□□□□ -1.72
PEX3P56589 IGLVIV-53-201ENST00000520107 367 ntBASIC4.3□□□□□ -1.72
PEX3P56589 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.3□□□□□ -1.72
PEX3P56589 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.3□□□□□ -1.72
PEX3P56589 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.3□□□□□ -1.72
PEX3P56589 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.3□□□□□ -1.72
PEX3P56589 BNIP3P5-201ENST00000562290 498 ntBASIC4.3□□□□□ -1.72
PEX3P56589 SULT1C2P2-201ENST00000562517 294 ntBASIC4.3□□□□□ -1.72
PEX3P56589 AC079148.1-201ENST00000565944 819 ntBASIC4.3□□□□□ -1.72
PEX3P56589 AC098483.2-201ENST00000603158 454 ntBASIC4.3□□□□□ -1.72
PEX3P56589 FP236240.3-201ENST00000623061 327 ntBASIC4.3□□□□□ -1.72
PEX3P56589 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.3□□□□□ -1.72
PEX3P56589 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PEX3P56589 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PEX3P56589 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PEX3P56589 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PEX3P56589 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PEX3P56589 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PEX3P56589 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.29□□□□□ -1.72
PEX3P56589 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PEX3P56589 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PEX3P56589 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PEX3P56589 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PEX3P56589 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.29□□□□□ -1.72
PEX3P56589 NANOGP6-201ENST00000429190 847 ntBASIC4.29□□□□□ -1.72
PEX3P56589 AC011742.1-201ENST00000431448 434 ntBASIC4.29□□□□□ -1.72
PEX3P56589 AL035551.1-201ENST00000446931 348 ntBASIC4.29□□□□□ -1.72
PEX3P56589 RPS17P13-201ENST00000448974 407 ntBASIC4.29□□□□□ -1.72
PEX3P56589 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.29□□□□□ -1.72
PEX3P56589 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PEX3P56589 GAPDHP36-201ENST00000480688 918 ntBASIC4.29□□□□□ -1.72
PEX3P56589 AC107398.1-201ENST00000486904 505 ntBASIC4.29□□□□□ -1.72
PEX3P56589 RN7SL323P-201ENST00000494712 295 ntBASIC4.29□□□□□ -1.72
PEX3P56589 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.29□□□□□ -1.72
PEX3P56589 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.29□□□□□ -1.72
PEX3P56589 NPM1P41-201ENST00000512920 831 ntBASIC4.29□□□□□ -1.72
PEX3P56589 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.29□□□□□ -1.72
PEX3P56589 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PEX3P56589 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.29□□□□□ -1.72
PEX3P56589 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.29□□□□□ -1.72
PEX3P56589 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.29□□□□□ -1.72
PEX3P56589 OR1AB1P-201ENST00000585564 761 ntBASIC4.29□□□□□ -1.72
PEX3P56589 AL020997.2-201ENST00000602607 184 ntBASIC4.29□□□□□ -1.72
PEX3P56589 AP001033.2-201ENST00000609701 1003 ntBASIC4.29□□□□□ -1.72
PEX3P56589 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.29□□□□□ -1.72
PEX3P56589 AL354798.1-201ENST00000622505 329 ntBASIC4.29□□□□□ -1.72
PEX3P56589 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.29□□□□□ -1.72
PEX3P56589 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PEX3P56589 LINC02471-203ENST00000641941 4752 ntBASIC4.29□□□□□ -1.72
PEX3P56589 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PEX3P56589 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms