Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.66□□□□□ -1.66
NR1H2P55055 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NR1H2P55055 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.66□□□□□ -1.66
NR1H2P55055 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.66□□□□□ -1.66
NR1H2P55055 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.66□□□□□ -1.66
NR1H2P55055 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 AC015688.2-201ENST00000584523 262 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 ELOCP28-201ENST00000590044 317 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.66□□□□□ -1.66
NR1H2P55055 GAS5-AS1-201ENST00000602767 694 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 LLPHP1-201ENST00000603571 367 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AC008814.1-201ENST00000603797 406 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 MTND3P19-201ENST00000603825 345 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.66□□□□□ -1.66
NR1H2P55055 Z99289.3-201ENST00000605586 594 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AL355493.4-201ENST00000618530 292 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.66□□□□□ -1.66
NR1H2P55055 AC022509.4-201ENST00000621404 572 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 AC098679.5-201ENST00000624394 571 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
NR1H2P55055 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NR1H2P55055 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NR1H2P55055 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NR1H2P55055 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NR1H2P55055 EOGT-210ENST00000615922 1931 ntBASIC4.66□□□□□ -1.66
NR1H2P55055 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NR1H2P55055 Z98755.1-201ENST00000407015 1384 ntBASIC4.65□□□□□ -1.66
NR1H2P55055 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.65□□□□□ -1.66
NR1H2P55055 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
NR1H2P55055 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NR1H2P55055 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
NR1H2P55055 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NR1H2P55055 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NR1H2P55055 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.65□□□□□ -1.66
NR1H2P55055 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NR1H2P55055 KPNA2P2-201ENST00000419546 1489 ntBASIC4.65□□□□□ -1.66
NR1H2P55055 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NR1H2P55055 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NR1H2P55055 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NR1H2P55055 RNU6-921P-201ENST00000384361 107 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 MIR105-1-201ENST00000385222 81 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 ENSAP1-201ENST00000392855 326 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AC073264.1-201ENST00000411508 416 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 VDAC1P9-201ENST00000412766 841 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.65□□□□□ -1.67
NR1H2P55055 RPL22P18-201ENST00000417197 377 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AL356320.2-201ENST00000417263 507 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 BOLA3P4-201ENST00000418151 400 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 RBMY2KP-201ENST00000418221 992 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 KRR1P1-201ENST00000419430 803 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 MTCO3P1-205ENST00000422088 832 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 GTF2IP23-201ENST00000423746 351 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AC005345.1-201ENST00000431868 217 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.65□□□□□ -1.67
NR1H2P55055 AC093155.1-201ENST00000440164 826 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.65□□□□□ -1.67
NR1H2P55055 AC004022.1-201ENST00000447766 1066 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 PPIAP3-201ENST00000450588 505 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AL162388.1-201ENST00000450912 352 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 snoU13.20-201ENST00000459180 104 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.65□□□□□ -1.67
NR1H2P55055 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NR1H2P55055 AC104971.1-201ENST00000495117 578 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 RPS4XP18-201ENST00000495480 763 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AC084024.2-201ENST00000503480 791 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.65□□□□□ -1.67
NR1H2P55055 RPS4XP20-201ENST00000505751 772 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 MTCYBP16-201ENST00000509187 1129 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NR1H2P55055 AC093755.1-201ENST00000512950 1023 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
NR1H2P55055 AP004607.2-201ENST00000533949 322 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 CYCSP28-201ENST00000534284 321 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.65□□□□□ -1.67
NR1H2P55055 AC092490.3-201ENST00000545370 572 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 MTND4P33-201ENST00000556706 766 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AC079075.1-201ENST00000559543 878 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 GTF2IP8-201ENST00000560687 584 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AC009097.3-201ENST00000563557 1018 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AC023813.2-201ENST00000564321 469 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.65□□□□□ -1.67
NR1H2P55055 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.65□□□□□ -1.67
NR1H2P55055 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.65□□□□□ -1.67
NR1H2P55055 AC006116.3-201ENST00000592968 361 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.65□□□□□ -1.67
NR1H2P55055 AL049539.1-201ENST00000611964 459 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AC005332.6-201ENST00000613178 446 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AL158196.1-201ENST00000616786 434 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 AL158163.2-201ENST00000619110 700 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 CYP4F35P-202ENST00000636121 390 ntBASIC4.65□□□□□ -1.67
NR1H2P55055 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NR1H2P55055 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NR1H2P55055 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms