Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
EPHB3P54753 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 AL022578.1-201ENST00000439330 1433 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
EPHB3P54753 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
EPHB3P54753 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
EPHB3P54753 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.65□□□□□ -1.5
EPHB3P54753 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EPHB3P54753 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EPHB3P54753 AC117529.2-201ENST00000512159 2068 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EPHB3P54753 AC026523.2-201ENST00000625039 7739 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
EPHB3P54753 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EPHB3P54753 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.65□□□□□ -1.5
EPHB3P54753 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
EPHB3P54753 AC083843.2-201ENST00000568248 6253 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 RNA5SP305-201ENST00000362665 119 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 SNORA17.1-201ENST00000362945 126 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 Y_RNA.89-201ENST00000363031 102 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 Y_RNA.295-201ENST00000364918 102 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 RNA5SP88-201ENST00000365560 109 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 RNU4-31P-201ENST00000384211 141 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 MIR105-1-201ENST00000385222 81 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 SNORA40.3-201ENST00000390964 122 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 CALM2P3-201ENST00000400429 449 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 U3.36-201ENST00000408418 213 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.65□□□□□ -1.5
EPHB3P54753 AL389915.1-201ENST00000422463 466 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.65□□□□□ -1.5
EPHB3P54753 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.65□□□□□ -1.5
EPHB3P54753 USP9YP9-201ENST00000429406 715 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 AC073464.1-201ENST00000429823 534 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.65□□□□□ -1.5
EPHB3P54753 SEPT7P5-201ENST00000434048 306 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.65□□□□□ -1.5
EPHB3P54753 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.65□□□□□ -1.5
EPHB3P54753 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.65□□□□□ -1.5
EPHB3P54753 OR6K1P-201ENST00000456766 971 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 ARPC3P2-201ENST00000457786 533 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 RN7SL97P-201ENST00000486780 299 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.65□□□□□ -1.5
EPHB3P54753 RPS4XP20-201ENST00000505751 772 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 AC104108.1-201ENST00000509930 412 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 RN7SKP66-201ENST00000516681 231 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 PAICSP4-201ENST00000517543 1253 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EPHB3P54753 AK6P1-201ENST00000540219 478 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 AL157687.1-201ENST00000554853 619 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 AP001004.1-201ENST00000582468 324 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 TAS2R6P-201ENST00000605022 826 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.65□□□□□ -1.5
EPHB3P54753 AL590282.1-201ENST00000610379 1136 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 AL442067.2-201ENST00000614033 363 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 AC090510.2-201ENST00000617465 629 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 AC136475.10-201ENST00000620253 385 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
EPHB3P54753 AC112487.2-201ENST00000637950 304 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.65□□□□□ -1.5
EPHB3P54753 AC073869.8-201ENST00000641806 335 ntBASIC5.65□□□□□ -1.5
EPHB3P54753 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
EPHB3P54753 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
EPHB3P54753 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
EPHB3P54753 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
EPHB3P54753 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
EPHB3P54753 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
EPHB3P54753 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.51
EPHB3P54753 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
EPHB3P54753 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
EPHB3P54753 AC107021.2-201ENST00000567714 2095 ntBASIC5.65□□□□□ -1.51
EPHB3P54753 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
EPHB3P54753 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
EPHB3P54753 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.64□□□□□ -1.51
EPHB3P54753 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
EPHB3P54753 HSPA8P18-201ENST00000439846 1928 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.64□□□□□ -1.51
EPHB3P54753 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
EPHB3P54753 AL078621.3-201ENST00000623707 2042 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
EPHB3P54753 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
EPHB3P54753 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.64□□□□□ -1.51
EPHB3P54753 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.64□□□□□ -1.51
EPHB3P54753 RNU5F-6P-201ENST00000362979 116 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 RNU6-1090P-201ENST00000364065 94 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 SNORD56.6-201ENST00000384569 71 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 RNA5SP105-201ENST00000391123 113 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AL645733.1-201ENST00000402250 217 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 RN7SKP125-201ENST00000410481 302 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.64□□□□□ -1.51
EPHB3P54753 AC069157.1-201ENST00000421749 137 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 HSPD1P12-201ENST00000429127 1069 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.64□□□□□ -1.51
EPHB3P54753 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.64□□□□□ -1.51
EPHB3P54753 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.64□□□□□ -1.51
EPHB3P54753 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.64□□□□□ -1.51
EPHB3P54753 HMGB1P45-201ENST00000435986 653 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.64□□□□□ -1.51
EPHB3P54753 RPL12P3-201ENST00000440080 396 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AL033528.1-201ENST00000453780 140 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms