Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.22□□□□□ -1.73
BRCC3P46736 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.22□□□□□ -1.73
BRCC3P46736 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BRCC3P46736 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRCC3P46736 AP002001.2-201ENST00000529025 1469 ntBASIC4.22□□□□□ -1.73
BRCC3P46736 AC018529.3-201ENST00000624212 2254 ntBASIC4.21□□□□□ -1.73
BRCC3P46736 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.21□□□□□ -1.73
BRCC3P46736 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.73
BRCC3P46736 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.21□□□□□ -1.73
BRCC3P46736 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.21□□□□□ -1.74
BRCC3P46736 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.21□□□□□ -1.74
BRCC3P46736 OR6K3-202ENST00000368146 996 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 MIR670-201ENST00000390142 98 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 RNA5SP171-201ENST00000391071 115 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 PTGES3P2-201ENST00000407942 482 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 RN7SKP156-201ENST00000410308 342 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 ARL2BPP3-201ENST00000421226 480 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.21□□□□□ -1.74
BRCC3P46736 DPY19L1P2-201ENST00000426647 915 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 AL035246.1-201ENST00000433554 1255 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BRCC3P46736 HMGB1P5-202ENST00000451497 985 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 HMGB1P26-201ENST00000452520 628 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 AL121877.1-201ENST00000453704 622 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 CABYRP1-201ENST00000465493 1045 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 RPS26P28-201ENST00000470806 348 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 AC093663.2-201ENST00000484625 313 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 AP002812.1-201ENST00000495378 474 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 PPBPP1-201ENST00000510807 373 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 NDUFB4P12-201ENST00000513465 390 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 AC087369.1-201ENST00000520775 996 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 OR4R2P-201ENST00000530815 597 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.21□□□□□ -1.74
BRCC3P46736 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.21□□□□□ -1.74
BRCC3P46736 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.21□□□□□ -1.74
BRCC3P46736 AL121834.1-201ENST00000572284 509 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.21□□□□□ -1.74
BRCC3P46736 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.21□□□□□ -1.74
BRCC3P46736 AC104662.1-201ENST00000604448 511 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 AC010200.2-201ENST00000605098 235 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.21□□□□□ -1.74
BRCC3P46736 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
BRCC3P46736 AC124312.6-202ENST00000623624 418 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 AC012442.3-202ENST00000636742 206 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 OR8B1P-202ENST00000641132 1178 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
BRCC3P46736 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
BRCC3P46736 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.21□□□□□ -1.74
BRCC3P46736 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
BRCC3P46736 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
BRCC3P46736 AC093311.1-201ENST00000506586 2021 ntBASIC4.21□□□□□ -1.74
BRCC3P46736 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
BRCC3P46736 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
BRCC3P46736 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BRCC3P46736 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BRCC3P46736 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BRCC3P46736 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCC3P46736 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCC3P46736 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
BRCC3P46736 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRCC3P46736 OR4A15-201ENST00000314706 1035 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 RNA5SP52-201ENST00000362448 134 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRCC3P46736 PTMAP2-201ENST00000397627 327 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.2□□□□□ -1.74
BRCC3P46736 AC004552.1-201ENST00000419089 348 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BRCC3P46736 OR4F13P-201ENST00000428478 931 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 AC018644.1-201ENST00000429934 551 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCC3P46736 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCC3P46736 NOTCH2P1-201ENST00000443481 624 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.2□□□□□ -1.74
BRCC3P46736 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.2□□□□□ -1.74
BRCC3P46736 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.2□□□□□ -1.74
BRCC3P46736 RPS26P3-201ENST00000470205 348 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 AC090543.2-201ENST00000483963 348 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 AC004057.1-201ENST00000485827 348 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCC3P46736 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.2□□□□□ -1.74
BRCC3P46736 TRMT10BP1-201ENST00000519377 943 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.2□□□□□ -1.74
BRCC3P46736 HIGD1AP18-201ENST00000520730 278 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.2□□□□□ -1.74
BRCC3P46736 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.2□□□□□ -1.74
BRCC3P46736 AC068714.1-201ENST00000559623 800 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 HNRNPCP4-201ENST00000571636 900 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 AC112230.1-201ENST00000604342 547 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCC3P46736 AP002371.2-201ENST00000624450 503 ntBASIC4.2□□□□□ -1.74
BRCC3P46736 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCC3P46736 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.2□□□□□ -1.74
BRCC3P46736 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRCC3P46736 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
BRCC3P46736 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRCC3P46736 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
BRCC3P46736 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BRCC3P46736 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRCC3P46736 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms