Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC6A4P31645 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC6A4P31645 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC6A4P31645 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC6A4P31645 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC6A4P31645 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SLC6A4P31645 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SLC6A4P31645 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AL139098.1-201ENST00000407291 389 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 AL663109.1-201ENST00000411498 844 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC6A4P31645 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 AC116337.2-201ENST00000477662 156 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 HSPE1P23-201ENST00000509838 286 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 HMGB3P13-201ENST00000511263 607 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 AC010625.1-201ENST00000511296 403 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 AC109471.1-201ENST00000511631 612 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC6A4P31645 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AC018442.3-201ENST00000523025 183 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AC011260.1-201ENST00000578420 472 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.12□□□□□ -1.59
SLC6A4P31645 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AC078795.2-201ENST00000602835 1252 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 AL031320.1-201ENST00000604177 357 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 AC018695.5-201ENST00000605872 315 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 AC004492.1-201ENST00000607036 742 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AC092184.1-201ENST00000625042 715 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC6A4P31645 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC6A4P31645 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC6A4P31645 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC6A4P31645 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC6A4P31645 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SLC6A4P31645 TRIM51GP-201ENST00000534741 1350 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 AL356473.1-201ENST00000406203 1408 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.12□□□□□ -1.59
SLC6A4P31645 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.12□□□□□ -1.59
SLC6A4P31645 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SLC6A4P31645 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC6A4P31645 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SLC6A4P31645 AL606537.1-201ENST00000607258 2011 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC6A4P31645 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SLC6A4P31645 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC6A4P31645 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SLC6A4P31645 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC6A4P31645 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC6A4P31645 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC6A4P31645 AC063976.2-201ENST00000425667 3556 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SLC6A4P31645 RNU6-582P-201ENST00000362989 107 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 RNU6-492P-201ENST00000363035 104 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 Y_RNA.408-201ENST00000383987 102 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 RNU6-272P-201ENST00000411028 104 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 RPL7P8-201ENST00000411964 730 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC6A4P31645 AC048351.1-201ENST00000420064 602 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 CENPIP1-201ENST00000425713 902 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 AL360081.1-201ENST00000428299 555 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC6A4P31645 MTND4P6-201ENST00000438297 472 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 Z80107.2-201ENST00000445127 392 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 RPL7P59-201ENST00000447700 943 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 OR51K1P-201ENST00000510214 950 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 RNU6-885P-201ENST00000516607 104 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC6A4P31645 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC6A4P31645 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms