Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 SUMO2P20-201ENST00000520803 283 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.19□□□□□ -1.74
CASQ1P31415 BRD9P1-201ENST00000529855 560 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.19□□□□□ -1.74
CASQ1P31415 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.19□□□□□ -1.74
CASQ1P31415 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.19□□□□□ -1.74
CASQ1P31415 MIR548Y-201ENST00000582739 110 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 KPNA2P3-201ENST00000584190 848 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.19□□□□□ -1.74
CASQ1P31415 AL365503.1-201ENST00000605247 905 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 AC133644.2-201ENST00000608142 540 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 AL450489.1-201ENST00000612071 468 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CASQ1P31415 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CASQ1P31415 AC021755.1-201ENST00000559747 1447 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 DHX40P1-201ENST00000588725 1412 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 ZNF826P-207ENST00000622273 1910 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CASQ1P31415 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CASQ1P31415 AP002001.2-201ENST00000529025 1469 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CASQ1P31415 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CASQ1P31415 RNA5SP295-201ENST00000362655 121 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 HNRNPDP2-201ENST00000406475 478 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.18□□□□□ -1.74
CASQ1P31415 OR5AW1P-201ENST00000426334 1006 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 RANP8-201ENST00000444720 713 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.18□□□□□ -1.74
CASQ1P31415 AC010468.1-201ENST00000461022 817 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.18□□□□□ -1.74
CASQ1P31415 OR8G5-201ENST00000524943 1041 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.18□□□□□ -1.74
CASQ1P31415 AP000676.2-201ENST00000529711 301 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.18□□□□□ -1.74
CASQ1P31415 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.18□□□□□ -1.74
CASQ1P31415 AL389895.1-201ENST00000554127 252 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.18□□□□□ -1.74
CASQ1P31415 CYP2C60P-201ENST00000566088 139 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.18□□□□□ -1.74
CASQ1P31415 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.18□□□□□ -1.74
CASQ1P31415 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.18□□□□□ -1.74
CASQ1P31415 AL133247.2-201ENST00000603236 482 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.18□□□□□ -1.74
CASQ1P31415 AC117490.2-201ENST00000610042 594 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 AC068870.2-201ENST00000620635 389 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 AC092184.1-201ENST00000625042 715 ntBASIC4.18□□□□□ -1.74
CASQ1P31415 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CASQ1P31415 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CASQ1P31415 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.17□□□□□ -1.74
CASQ1P31415 AC007256.1-201ENST00000392253 2765 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CASQ1P31415 AC005183.1-201ENST00000603687 1979 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.17□□□□□ -1.74
CASQ1P31415 EI24P2-201ENST00000397776 1076 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CASQ1P31415 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CASQ1P31415 AC002069.1-201ENST00000429649 1159 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 RPL21P112-201ENST00000434403 463 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 HMGB1P45-201ENST00000435986 653 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.17□□□□□ -1.74
CASQ1P31415 SLC31A1P1-201ENST00000451221 567 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 NANOGP10-201ENST00000453325 895 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 RPS4XP13-201ENST00000483219 789 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.17□□□□□ -1.74
CASQ1P31415 HMGB3P15-201ENST00000507326 574 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 RN7SKP209-201ENST00000516888 304 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.17□□□□□ -1.74
CASQ1P31415 AC010476.1-201ENST00000519111 851 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.17□□□□□ -1.74
CASQ1P31415 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CASQ1P31415 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.17□□□□□ -1.74
CASQ1P31415 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.17□□□□□ -1.74
CASQ1P31415 AC025260.1-201ENST00000548858 430 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.17□□□□□ -1.74
CASQ1P31415 AC010735.1-201ENST00000567305 1026 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CASQ1P31415 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.17□□□□□ -1.74
CASQ1P31415 AC090948.1-201ENST00000607464 549 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 AC005156.1-201ENST00000613371 573 ntBASIC4.17□□□□□ -1.74
CASQ1P31415 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.17□□□□□ -1.74
CASQ1P31415 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.17□□□□□ -1.74
CASQ1P31415 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.17□□□□□ -1.74
CASQ1P31415 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.17□□□□□ -1.74
CASQ1P31415 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CASQ1P31415 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CASQ1P31415 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CASQ1P31415 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CASQ1P31415 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CASQ1P31415 RNU6-185P-201ENST00000384421 107 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.16□□□□□ -1.74
CASQ1P31415 AL035696.2-201ENST00000407941 709 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 EI24P1-201ENST00000416584 867 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 AIMP1P1-201ENST00000418670 937 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 AC241520.1-201ENST00000422654 1099 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.16□□□□□ -1.74
CASQ1P31415 SNORA71B-202ENST00000439232 272 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 AL662791.1-201ENST00000441992 928 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 RPS29P31-201ENST00000446147 164 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 RPL38P1-201ENST00000460914 211 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 AC092754.2-201ENST00000463506 460 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms