Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 IGKV2-23-201ENST00000518729 323 ntBASIC2.97□□□□□ -1.93
HLA-DMBP28068 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DMBP28068 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMBP28068 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMBP28068 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DMBP28068 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DMBP28068 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.97□□□□□ -1.93
HLA-DMBP28068 AC010615.3-201ENST00000597319 394 ntBASIC2.97□□□□□ -1.93
HLA-DMBP28068 AC091167.4-201ENST00000605079 184 ntBASIC2.97□□□□□ -1.93
HLA-DMBP28068 AP005212.4-201ENST00000614206 710 ntBASIC2.97□□□□□ -1.93
HLA-DMBP28068 AC020978.9-201ENST00000624380 1141 ntBASIC2.97□□□□□ -1.93
HLA-DMBP28068 AL118496.1-201ENST00000440201 1812 ntBASIC2.97□□□□□ -1.93
HLA-DMBP28068 NCAPGP1-201ENST00000505112 1814 ntBASIC2.97□□□□□ -1.93
HLA-DMBP28068 AL353746.1-201ENST00000566293 6881 ntBASIC2.97□□□□□ -1.93
HLA-DMBP28068 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DMBP28068 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DMBP28068 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DMBP28068 AC090229.1-201ENST00000590983 1609 ntBASIC2.97□□□□□ -1.93
HLA-DMBP28068 AL136964.1-201ENST00000622038 2990 ntBASIC2.97□□□□□ -1.93
HLA-DMBP28068 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HLA-DMBP28068 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.96□□□□□ -1.93
HLA-DMBP28068 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
HLA-DMBP28068 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
HLA-DMBP28068 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
HLA-DMBP28068 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DMBP28068 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DMBP28068 RNU6-1251P-201ENST00000364502 107 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 RNA5SP283-201ENST00000365604 119 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DMBP28068 AC240504.1-201ENST00000395709 845 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 RPL7P2-201ENST00000427639 268 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 NPM1P24-201ENST00000428039 894 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 AC009263.1-201ENST00000441193 1239 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 MTCYBP21-201ENST00000443300 1113 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 AC010683.1-201ENST00000473673 378 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DMBP28068 AC083899.3-201ENST00000603413 594 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 Z82195.1-201ENST00000604558 398 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 BRDTP1-201ENST00000605735 677 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 AL096803.3-201ENST00000609032 532 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 C2orf27A-204ENST00000623058 969 ntBASIC2.96□□□□□ -1.94
HLA-DMBP28068 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DMBP28068 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
HLA-DMBP28068 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DMBP28068 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DMBP28068 RLIMP1-201ENST00000339626 1680 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DMBP28068 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DMBP28068 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DMBP28068 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DMBP28068 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC025750.1-201ENST00000399891 379 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 PPIAP31-201ENST00000405422 495 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC010740.1-201ENST00000417035 684 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 TRGV6-201ENST00000417928 299 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 AL691449.1-201ENST00000426570 421 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 MTCYBP29-201ENST00000436327 1006 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC083863.1-201ENST00000438811 231 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC010307.1-201ENST00000467206 836 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC011037.1-201ENST00000483964 558 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 TRBV12-2-201ENST00000489763 344 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 MTND4LP31-201ENST00000514859 294 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 SNORD116-30-201ENST00000516468 85 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 RNU6-1231P-201ENST00000517185 103 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC106785.1-201ENST00000565935 262 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 MIR4286-201ENST00000580651 93 ntBASIC2.95□□□□□ -1.94
HLA-DMBP28068 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DMBP28068 AL049634.3-201ENST00000604968 457 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms