Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL021368.2-201ENST00000606125 5352 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC116667.1-201ENST00000604855 2072 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DMAP28067 PWAR6-201ENST00000552334 4618 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DMAP28067 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 MTND5P3-201ENST00000438536 1800 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DMAP28067 OR4K15-201ENST00000305051 1216 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DMAP28067 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 RNU6-244P-201ENST00000391028 104 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 RN7SKP229-201ENST00000410465 302 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 CASKP1-201ENST00000412870 582 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DMAP28067 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 AL590139.1-201ENST00000416267 400 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DMAP28067 HMGB1P37-201ENST00000439613 609 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 MED6P1-201ENST00000439659 713 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 AC023512.1-201ENST00000444513 499 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 TRBV12-2-201ENST00000489763 344 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DMAP28067 RNU4-60P-201ENST00000517239 135 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 SUMO2P20-201ENST00000520803 283 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 AC008489.1-201ENST00000524271 483 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DMAP28067 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DMAP28067 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 TVP23BP1-201ENST00000557500 617 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 AC090877.1-201ENST00000561418 344 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 AP004372.1-201ENST00000604842 844 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 AC090525.3-201ENST00000605601 189 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 AC092653.1-201ENST00000608509 531 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 AC002044.3-201ENST00000623314 541 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 ATE1-AS1-202ENST00000636460 506 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 U6.98-201ENST00000637157 84 ntBASIC3.38□□□□□ -1.87
HLA-DMAP28067 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DMAP28067 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DMAP28067 OR56B2P-202ENST00000641377 2453 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DMAP28067 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DMAP28067 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DMAP28067 AC131971.1-201ENST00000332881 1482 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 RNU6-283P-201ENST00000364788 107 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DMAP28067 RNU6-185P-201ENST00000384421 107 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 AC092642.1-201ENST00000392417 425 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 RPS26P8-201ENST00000393490 348 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 HMGB1P10-201ENST00000395823 563 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DMAP28067 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 MOB1AP1-201ENST00000430903 535 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 RPL37P6-202ENST00000464216 403 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 AC087312.1-201ENST00000471411 480 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 RN7SL629P-201ENST00000489622 285 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 RPL35P6-201ENST00000490024 372 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 RN7SL691P-201ENST00000494487 301 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 OR5M14P-201ENST00000506803 618 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 NDUFB9P3-201ENST00000521269 501 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 AC093331.1-201ENST00000521474 169 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 AP001636.2-201ENST00000525517 696 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 MTND5P21-201ENST00000531961 522 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 MIR4270-201ENST00000581799 70 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 MIR5684-201ENST00000585074 65 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DMAP28067 AC016769.4-201ENST00000616893 535 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 AL445528.2-201ENST00000620582 470 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HLA-DMAP28067 ZNF542P-204ENST00000482727 1305 ntBASIC3.37□□□□□ -1.87
HLA-DMAP28067 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DMAP28067 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms