Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CYCSP53-201ENST00000455540 265 ntBASIC4.56□□□□□ -1.68
TOP1P11387 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.56□□□□□ -1.68
TOP1P11387 AC006511.1-201ENST00000470614 315 ntBASIC4.56□□□□□ -1.68
TOP1P11387 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.56□□□□□ -1.68
TOP1P11387 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.56□□□□□ -1.68
TOP1P11387 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TOP1P11387 AC108120.2-201ENST00000512973 294 ntBASIC4.56□□□□□ -1.68
TOP1P11387 AC067904.2-201ENST00000517322 1283 ntBASIC4.56□□□□□ -1.68
TOP1P11387 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.56□□□□□ -1.68
TOP1P11387 OR4A12P-201ENST00000530847 918 ntBASIC4.56□□□□□ -1.68
TOP1P11387 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.56□□□□□ -1.68
TOP1P11387 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
TOP1P11387 AC034105.4-201ENST00000568304 277 ntBASIC4.56□□□□□ -1.68
TOP1P11387 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.56□□□□□ -1.68
TOP1P11387 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.56□□□□□ -1.68
TOP1P11387 AP003392.5-201ENST00000607857 415 ntBASIC4.56□□□□□ -1.68
TOP1P11387 AP003072.4-201ENST00000624580 310 ntBASIC4.56□□□□□ -1.68
TOP1P11387 AF001550.2-201ENST00000636643 217 ntBASIC4.56□□□□□ -1.68
TOP1P11387 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.56□□□□□ -1.68
TOP1P11387 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
TOP1P11387 BDP1P-201ENST00000582658 1990 ntBASIC4.56□□□□□ -1.68
TOP1P11387 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TOP1P11387 AC006042.3-201ENST00000454684 1469 ntBASIC4.56□□□□□ -1.68
TOP1P11387 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TOP1P11387 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.55□□□□□ -1.68
TOP1P11387 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.55□□□□□ -1.68
TOP1P11387 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.55□□□□□ -1.68
TOP1P11387 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TOP1P11387 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TOP1P11387 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TOP1P11387 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.55□□□□□ -1.68
TOP1P11387 GSTA12P-201ENST00000402398 508 ntBASIC4.55□□□□□ -1.68
TOP1P11387 SNORA3.3-201ENST00000408712 125 ntBASIC4.55□□□□□ -1.68
TOP1P11387 SNORA11-201ENST00000408789 128 ntBASIC4.55□□□□□ -1.68
TOP1P11387 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.55□□□□□ -1.68
TOP1P11387 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.55□□□□□ -1.68
TOP1P11387 YWHAQP9-201ENST00000445891 512 ntBASIC4.55□□□□□ -1.68
TOP1P11387 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.55□□□□□ -1.68
TOP1P11387 HMGB1P16-201ENST00000447155 540 ntBASIC4.55□□□□□ -1.68
TOP1P11387 RPL7P24-201ENST00000493052 752 ntBASIC4.55□□□□□ -1.68
TOP1P11387 RN7SKP141-201ENST00000516167 338 ntBASIC4.55□□□□□ -1.68
TOP1P11387 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.55□□□□□ -1.68
TOP1P11387 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TOP1P11387 AC020914.4-201ENST00000597690 277 ntBASIC4.55□□□□□ -1.68
TOP1P11387 HMGB1P50-201ENST00000605814 607 ntBASIC4.55□□□□□ -1.68
TOP1P11387 AL355816.1-201ENST00000607951 118 ntBASIC4.55□□□□□ -1.68
TOP1P11387 AL591424.2-201ENST00000617023 128 ntBASIC4.55□□□□□ -1.68
TOP1P11387 AC007342.8-201ENST00000623278 678 ntBASIC4.55□□□□□ -1.68
TOP1P11387 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.55□□□□□ -1.68
TOP1P11387 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TOP1P11387 AC134882.1-201ENST00000603738 1676 ntBASIC4.54□□□□□ -1.68
TOP1P11387 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TOP1P11387 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.54□□□□□ -1.68
TOP1P11387 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.54□□□□□ -1.68
TOP1P11387 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.54□□□□□ -1.68
TOP1P11387 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TOP1P11387 U1.1-201ENST00000384101 164 ntBASIC4.54□□□□□ -1.68
TOP1P11387 RNU1-89P-201ENST00000384592 164 ntBASIC4.54□□□□□ -1.68
TOP1P11387 ZNF602P-201ENST00000405929 924 ntBASIC4.54□□□□□ -1.68
TOP1P11387 RN7SKP56-201ENST00000410513 331 ntBASIC4.54□□□□□ -1.68
TOP1P11387 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.54□□□□□ -1.68
TOP1P11387 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.54□□□□□ -1.68
TOP1P11387 AF228730.2-201ENST00000438784 848 ntBASIC4.54□□□□□ -1.68
TOP1P11387 AL353898.1-201ENST00000444055 238 ntBASIC4.54□□□□□ -1.68
TOP1P11387 RPS20P21-201ENST00000466859 343 ntBASIC4.54□□□□□ -1.68
TOP1P11387 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.54□□□□□ -1.68
TOP1P11387 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.54□□□□□ -1.68
TOP1P11387 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TOP1P11387 AC020593.1-201ENST00000507399 299 ntBASIC4.54□□□□□ -1.68
TOP1P11387 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.54□□□□□ -1.68
TOP1P11387 IGLVIV-53-201ENST00000520107 367 ntBASIC4.54□□□□□ -1.68
TOP1P11387 MTCO1P49-201ENST00000523429 802 ntBASIC4.54□□□□□ -1.68
TOP1P11387 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.54□□□□□ -1.68
TOP1P11387 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.54□□□□□ -1.68
TOP1P11387 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.54□□□□□ -1.68
TOP1P11387 SYT14P1-202ENST00000600441 1448 ntBASIC4.54□□□□□ -1.68
TOP1P11387 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TOP1P11387 AC083899.2-201ENST00000423285 1376 ntBASIC4.53□□□□□ -1.68
TOP1P11387 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TOP1P11387 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TOP1P11387 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TOP1P11387 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TOP1P11387 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
TOP1P11387 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TOP1P11387 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.53□□□□□ -1.68
TOP1P11387 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
TOP1P11387 MIR199A2-201ENST00000385289 110 ntBASIC4.53□□□□□ -1.68
TOP1P11387 RPL26P37-201ENST00000411983 438 ntBASIC4.53□□□□□ -1.68
TOP1P11387 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.53□□□□□ -1.68
TOP1P11387 KCTD9P3-201ENST00000434597 1169 ntBASIC4.53□□□□□ -1.68
TOP1P11387 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.53□□□□□ -1.68
TOP1P11387 Z74696.2-201ENST00000436514 498 ntBASIC4.53□□□□□ -1.68
TOP1P11387 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.53□□□□□ -1.68
TOP1P11387 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.53□□□□□ -1.68
TOP1P11387 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.53□□□□□ -1.68
TOP1P11387 RN7SL542P-201ENST00000467147 294 ntBASIC4.53□□□□□ -1.68
TOP1P11387 AC007688.1-201ENST00000475592 759 ntBASIC4.53□□□□□ -1.68
TOP1P11387 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.53□□□□□ -1.68
TOP1P11387 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.53□□□□□ -1.68
TOP1P11387 SAP18P1-201ENST00000512058 390 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms