Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC022079.2-201ENST00000619739 566 ntBASIC4.84□□□□□ -1.63
HOXC6P09630 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HOXC6P09630 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HOXC6P09630 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC6P09630 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC6P09630 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HOXC6P09630 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.84□□□□□ -1.64
HOXC6P09630 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HOXC6P09630 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HOXC6P09630 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 MFSD8-213ENST00000641134 1327 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 SNORA71.3-201ENST00000362582 128 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 SNORA70.4-201ENST00000365509 134 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 RNU6-1242P-201ENST00000391052 103 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 SNORD65-201ENST00000391079 73 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 AP002784.2-201ENST00000397300 549 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 RNU6ATAC-201ENST00000408749 126 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 AC107081.1-201ENST00000414975 361 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 TCEA1P4-201ENST00000415066 844 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 RPL22P18-201ENST00000417197 377 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 AC008173.1-201ENST00000418901 264 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 UBTFL3-201ENST00000418934 1024 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 CDY14P-201ENST00000431260 1014 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 RPS29P7-201ENST00000439662 171 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 CDY12P-201ENST00000440679 1015 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 AL353898.1-201ENST00000444055 238 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 RPL6P5-201ENST00000445678 828 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 CDY13P-201ENST00000445813 1015 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 OR6K5P-201ENST00000447050 945 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 AC004022.1-201ENST00000447766 1066 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 CDY23P-201ENST00000451661 1014 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC6P09630 AC008280.2-201ENST00000455473 307 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC6P09630 UBTFL6-201ENST00000477929 1024 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HOXC6P09630 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC6P09630 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC6P09630 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC6P09630 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 AC021146.7-201ENST00000509604 775 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC6P09630 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC6P09630 AC007834.2-201ENST00000536310 343 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC6P09630 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC6P09630 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC6P09630 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC6P09630 RPL23AP97-201ENST00000568955 471 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 MIR3936-201ENST00000584304 110 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 AP004372.1-201ENST00000604842 844 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 AC107952.2-201ENST00000606048 486 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXC6P09630 AC068137.4-201ENST00000638485 296 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HOXC6P09630 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC6P09630 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 MTND5P11-201ENST00000511037 1812 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HOXC6P09630 AC092162.3-201ENST00000624511 1624 ntBASIC4.83□□□□□ -1.64
HOXC6P09630 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC6P09630 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC6P09630 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HOXC6P09630 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC6P09630 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HOXC6P09630 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC6P09630 MAPK10-303ENST00000641324 3959 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC6P09630 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC6P09630 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC6P09630 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HOXC6P09630 RNU5B-1-201ENST00000363286 116 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 RNU4-28P-201ENST00000364739 141 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC6P09630 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
HOXC6P09630 SNORD96B-201ENST00000386148 79 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HOXC6P09630 AL359643.1-201ENST00000404109 423 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 RNA5SP296-201ENST00000410523 111 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC6P09630 PTP4A1P1-201ENST00000420539 515 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 AC000041.1-201ENST00000439655 175 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC6P09630 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.82□□□□□ -1.64
HOXC6P09630 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC6P09630 AC091564.1-201ENST00000464563 479 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC6P09630 ZNF321P-202ENST00000550843 495 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 AL352979.3-201ENST00000553515 247 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms