Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CTSDP07339 OR52H1-202ENST00000641796 1061 ntBASIC3.09□□□□□ -1.91
CTSDP07339 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTSDP07339 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSDP07339 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CTSDP07339 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CTSDP07339 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
CTSDP07339 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
CTSDP07339 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.09□□□□□ -1.92
CTSDP07339 AC073073.2-201ENST00000609827 2578 ntBASIC3.08□□□□□ -1.92
CTSDP07339 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTSDP07339 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTSDP07339 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTSDP07339 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTSDP07339 AL121657.1-201ENST00000327215 531 ntBASIC3.08□□□□□ -1.92
CTSDP07339 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.08□□□□□ -1.92
CTSDP07339 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
CTSDP07339 SNORA70C-201ENST00000384538 135 ntBASIC3.08□□□□□ -1.92
CTSDP07339 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CTSDP07339 AL590704.1-201ENST00000402856 794 ntBASIC3.08□□□□□ -1.92
CTSDP07339 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.08□□□□□ -1.92
CTSDP07339 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTSDP07339 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.08□□□□□ -1.92
CTSDP07339 LIPT1P1-201ENST00000415870 1186 ntBASIC3.08□□□□□ -1.92
CTSDP07339 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.08□□□□□ -1.92
CTSDP07339 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.08□□□□□ -1.92
CTSDP07339 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.08□□□□□ -1.92
CTSDP07339 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTSDP07339 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.08□□□□□ -1.92
CTSDP07339 MRPS31P2-201ENST00000451581 518 ntBASIC3.08□□□□□ -1.92
CTSDP07339 RPL9P32-201ENST00000464118 620 ntBASIC3.08□□□□□ -1.92
CTSDP07339 RPL7P19-201ENST00000469948 618 ntBASIC3.08□□□□□ -1.92
CTSDP07339 AP001086.1-201ENST00000494882 321 ntBASIC3.08□□□□□ -1.92
CTSDP07339 FCF1P3-201ENST00000496394 590 ntBASIC3.08□□□□□ -1.92
CTSDP07339 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.08□□□□□ -1.92
CTSDP07339 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.08□□□□□ -1.92
CTSDP07339 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.08□□□□□ -1.92
CTSDP07339 SNORD116-26-201ENST00000516006 96 ntBASIC3.08□□□□□ -1.92
CTSDP07339 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.08□□□□□ -1.92
CTSDP07339 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.08□□□□□ -1.92
CTSDP07339 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.08□□□□□ -1.92
CTSDP07339 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.08□□□□□ -1.92
CTSDP07339 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.08□□□□□ -1.92
CTSDP07339 RN7SL600P-201ENST00000581811 299 ntBASIC3.08□□□□□ -1.92
CTSDP07339 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.08□□□□□ -1.92
CTSDP07339 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.08□□□□□ -1.92
CTSDP07339 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.08□□□□□ -1.92
CTSDP07339 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTSDP07339 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.08□□□□□ -1.92
CTSDP07339 AF001550.2-201ENST00000636643 217 ntBASIC3.08□□□□□ -1.92
CTSDP07339 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTSDP07339 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTSDP07339 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTSDP07339 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTSDP07339 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CTSDP07339 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTSDP07339 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CTSDP07339 RNA5SP42-201ENST00000364278 115 ntBASIC3.07□□□□□ -1.92
CTSDP07339 RNA5SP130-201ENST00000364431 114 ntBASIC3.07□□□□□ -1.92
CTSDP07339 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.07□□□□□ -1.92
CTSDP07339 AL022722.2-201ENST00000402519 180 ntBASIC3.07□□□□□ -1.92
CTSDP07339 MTHFD2P2-201ENST00000407725 247 ntBASIC3.07□□□□□ -1.92
CTSDP07339 RNU6-55P-201ENST00000411092 107 ntBASIC3.07□□□□□ -1.92
CTSDP07339 RNU6-954P-201ENST00000411355 107 ntBASIC3.07□□□□□ -1.92
CTSDP07339 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.07□□□□□ -1.92
CTSDP07339 AIMP1P1-201ENST00000418670 937 ntBASIC3.07□□□□□ -1.92
CTSDP07339 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CTSDP07339 RPL17P36-201ENST00000420302 549 ntBASIC3.07□□□□□ -1.92
CTSDP07339 RCC2P2-201ENST00000422174 918 ntBASIC3.07□□□□□ -1.92
CTSDP07339 RPL31P12-201ENST00000422587 358 ntBASIC3.07□□□□□ -1.92
CTSDP07339 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.07□□□□□ -1.92
CTSDP07339 MRPS18BP2-201ENST00000434310 759 ntBASIC3.07□□□□□ -1.92
CTSDP07339 AC074367.1-201ENST00000438685 1125 ntBASIC3.07□□□□□ -1.92
CTSDP07339 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CTSDP07339 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.07□□□□□ -1.92
CTSDP07339 VN1R96P-201ENST00000446052 858 ntBASIC3.07□□□□□ -1.92
CTSDP07339 AL162151.2-201ENST00000448875 158 ntBASIC3.07□□□□□ -1.92
CTSDP07339 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.07□□□□□ -1.92
CTSDP07339 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.07□□□□□ -1.92
CTSDP07339 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.07□□□□□ -1.92
CTSDP07339 RPS7P7-201ENST00000463499 571 ntBASIC3.07□□□□□ -1.92
CTSDP07339 RN7SL385P-201ENST00000468873 276 ntBASIC3.07□□□□□ -1.92
CTSDP07339 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.07□□□□□ -1.92
CTSDP07339 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.07□□□□□ -1.92
CTSDP07339 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.07□□□□□ -1.92
CTSDP07339 AP000926.4-201ENST00000527351 454 ntBASIC3.07□□□□□ -1.92
CTSDP07339 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.07□□□□□ -1.92
CTSDP07339 AL389895.1-201ENST00000554127 252 ntBASIC3.07□□□□□ -1.92
CTSDP07339 AC025884.1-201ENST00000556034 378 ntBASIC3.07□□□□□ -1.92
CTSDP07339 PARP1P2-201ENST00000556806 195 ntBASIC3.07□□□□□ -1.92
CTSDP07339 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CTSDP07339 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.07□□□□□ -1.92
CTSDP07339 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.07□□□□□ -1.92
CTSDP07339 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.07□□□□□ -1.92
CTSDP07339 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTSDP07339 AC006254.3-201ENST00000603353 884 ntBASIC3.07□□□□□ -1.92
CTSDP07339 AL590392.1-201ENST00000604960 446 ntBASIC3.07□□□□□ -1.92
CTSDP07339 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTSDP07339 RNU4-89P-201ENST00000607443 133 ntBASIC3.07□□□□□ -1.92
CTSDP07339 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms