Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC129850.1-201ENST00000436203 508 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC092170.1-201ENST00000440211 356 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AL592437.1-201ENST00000443781 492 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 MRPL48P1-201ENST00000445390 636 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC104651.2-201ENST00000447549 528 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 LINC00888-204ENST00000487386 421 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC025674.1-201ENST00000507074 324 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 IGBP1P5-201ENST00000507524 1000 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 MTND1P5-201ENST00000517906 940 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DOAP06340 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 HIGD1AP17-201ENST00000554576 276 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC087465.1-201ENST00000560574 245 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 ACTR3BP3-201ENST00000565577 979 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC010546.1-201ENST00000569391 485 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC005332.10-201ENST00000612725 619 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AL031667.3-201ENST00000620124 655 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DOAP06340 CR381670.1-201ENST00000624291 1693 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 MTND4P34-201ENST00000572715 1371 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 OR5H15-201ENST00000383696 930 ntBASIC5.41□□□□□ -1.54
HLA-DOAP06340 AL080315.1-201ENST00000406055 466 ntBASIC5.41□□□□□ -1.54
HLA-DOAP06340 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 AC005002.1-201ENST00000447458 540 ntBASIC5.41□□□□□ -1.54
HLA-DOAP06340 RHEBP2-201ENST00000450289 600 ntBASIC5.41□□□□□ -1.54
HLA-DOAP06340 AL935212.3-201ENST00000450729 284 ntBASIC5.41□□□□□ -1.54
HLA-DOAP06340 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 AC113347.3-201ENST00000509113 148 ntBASIC5.41□□□□□ -1.54
HLA-DOAP06340 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 snoZ278.1-201ENST00000517059 112 ntBASIC5.41□□□□□ -1.54
HLA-DOAP06340 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 AC092851.1-201ENST00000535964 478 ntBASIC5.41□□□□□ -1.54
HLA-DOAP06340 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 AC078795.2-201ENST00000602835 1252 ntBASIC5.41□□□□□ -1.54
HLA-DOAP06340 AC073968.1-201ENST00000618594 637 ntBASIC5.41□□□□□ -1.54
HLA-DOAP06340 VN1R7P-201ENST00000619242 903 ntBASIC5.41□□□□□ -1.54
HLA-DOAP06340 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DOAP06340 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DOAP06340 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DOAP06340 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DOAP06340 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DOAP06340 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DOAP06340 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DOAP06340 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DOAP06340 MTND5P29-201ENST00000458676 1807 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 RNU6-543P-201ENST00000362576 108 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
HLA-DOAP06340 Y_RNA.465-201ENST00000384293 102 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 RNU6-452P-201ENST00000384406 107 ntBASIC5.4□□□□□ -1.54
HLA-DOAP06340 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DOAP06340 AC013404.1-201ENST00000413068 249 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms