Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 BTF3P5-201ENST00000457252 467 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.31□□□□□ -1.88
SPTA1P02549 AC113192.3-201ENST00000529152 742 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SPTA1P02549 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC3.31□□□□□ -1.88
SPTA1P02549 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.31□□□□□ -1.88
SPTA1P02549 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.31□□□□□ -1.88
SPTA1P02549 MIR3922-201ENST00000585192 84 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.31□□□□□ -1.88
SPTA1P02549 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.31□□□□□ -1.88
SPTA1P02549 AP000553.6-201ENST00000641242 118 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SPTA1P02549 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.31□□□□□ -1.88
SPTA1P02549 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPTA1P02549 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.3□□□□□ -1.88
SPTA1P02549 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.3□□□□□ -1.88
SPTA1P02549 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.3□□□□□ -1.88
SPTA1P02549 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SPTA1P02549 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPTA1P02549 BX890604.2-201ENST00000427883 474 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.3□□□□□ -1.88
SPTA1P02549 AC109925.1-201ENST00000478069 331 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.3□□□□□ -1.88
SPTA1P02549 UBE2NP1-201ENST00000545592 458 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 AC097505.1-201ENST00000610199 565 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.3□□□□□ -1.88
SPTA1P02549 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPTA1P02549 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SPTA1P02549 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SPTA1P02549 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPTA1P02549 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SPTA1P02549 AP000542.2-201ENST00000623199 6179 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.3□□□□□ -1.88
SPTA1P02549 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.3□□□□□ -1.88
SPTA1P02549 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SPTA1P02549 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SPTA1P02549 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SPTA1P02549 XGY1-201ENST00000381172 446 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 SNORA70B-201ENST00000384210 135 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 MIR1271-201ENST00000408537 86 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 AL024507.1-201ENST00000412741 274 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.3□□□□□ -1.88
SPTA1P02549 RPL7P36-201ENST00000444633 681 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.3□□□□□ -1.88
SPTA1P02549 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.3□□□□□ -1.88
SPTA1P02549 AC087369.1-201ENST00000520775 996 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 NELL2-211ENST00000548826 559 ntTSL 2 BASIC3.3□□□□□ -1.88
SPTA1P02549 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.3□□□□□ -1.88
SPTA1P02549 AC022968.1-201ENST00000567372 442 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 IGHV3-29-201ENST00000604817 344 ntBASIC3.3□□□□□ -1.88
SPTA1P02549 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPTA1P02549 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SPTA1P02549 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.29□□□□□ -1.88
SPTA1P02549 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SPTA1P02549 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SPTA1P02549 AL445529.1-201ENST00000398713 389 ntBASIC3.29□□□□□ -1.88
SPTA1P02549 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.29□□□□□ -1.88
SPTA1P02549 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.29□□□□□ -1.88
SPTA1P02549 VTI1BP4-201ENST00000427516 527 ntBASIC3.29□□□□□ -1.88
SPTA1P02549 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.29□□□□□ -1.88
SPTA1P02549 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.29□□□□□ -1.88
SPTA1P02549 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.29□□□□□ -1.88
SPTA1P02549 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SPTA1P02549 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.29□□□□□ -1.88
SPTA1P02549 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.29□□□□□ -1.88
SPTA1P02549 AC090286.3-201ENST00000573133 187 ntBASIC3.29□□□□□ -1.88
SPTA1P02549 AL162274.2-201ENST00000614406 332 ntBASIC3.29□□□□□ -1.88
SPTA1P02549 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SPTA1P02549 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
SPTA1P02549 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.29□□□□□ -1.88
SPTA1P02549 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SPTA1P02549 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SPTA1P02549 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.29□□□□□ -1.88
SPTA1P02549 MIR504-201ENST00000385065 83 ntBASIC3.29□□□□□ -1.88
SPTA1P02549 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.29□□□□□ -1.88
SPTA1P02549 AC005189.1-201ENST00000431286 310 ntBASIC3.29□□□□□ -1.88
SPTA1P02549 AC138409.2-202ENST00000507274 458 ntBASIC3.29□□□□□ -1.88
SPTA1P02549 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.29□□□□□ -1.88
SPTA1P02549 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.29□□□□□ -1.88
SPTA1P02549 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SPTA1P02549 AC024341.1-201ENST00000526444 1552 ntBASIC3.29□□□□□ -1.88
SPTA1P02549 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SPTA1P02549 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.28□□□□□ -1.88
SPTA1P02549 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SPTA1P02549 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SPTA1P02549 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SPTA1P02549 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SPTA1P02549 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SPTA1P02549 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
SPTA1P02549 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.28□□□□□ -1.88
SPTA1P02549 SKP1P3-201ENST00000429280 487 ntBASIC3.28□□□□□ -1.88
SPTA1P02549 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.28□□□□□ -1.88
SPTA1P02549 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.28□□□□□ -1.88
SPTA1P02549 AC093815.1-201ENST00000508637 280 ntBASIC3.28□□□□□ -1.88
SPTA1P02549 RNA5SP208-201ENST00000516156 78 ntBASIC3.28□□□□□ -1.88
SPTA1P02549 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.28□□□□□ -1.88
SPTA1P02549 OR4A12P-201ENST00000530847 918 ntBASIC3.28□□□□□ -1.88
SPTA1P02549 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.28□□□□□ -1.88
SPTA1P02549 AC010503.3-201ENST00000594355 540 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms