Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.18□□□□□ -1.74
COL4A1P02462 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A1P02462 AC011611.1-201ENST00000552179 197 ntBASIC4.18□□□□□ -1.74
COL4A1P02462 MIR486-1-201ENST00000612171 68 ntBASIC4.18□□□□□ -1.74
COL4A1P02462 CR392039.4-201ENST00000624968 501 ntBASIC4.18□□□□□ -1.74
COL4A1P02462 AL732372.2-225ENST00000642124 456 ntBASIC4.18□□□□□ -1.74
COL4A1P02462 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.18□□□□□ -1.74
COL4A1P02462 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A1P02462 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A1P02462 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
COL4A1P02462 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.18□□□□□ -1.74
COL4A1P02462 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A1P02462 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A1P02462 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A1P02462 GNG5P1-201ENST00000255500 204 ntBASIC4.17□□□□□ -1.74
COL4A1P02462 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL4A1P02462 GSTA8P-201ENST00000404253 637 ntBASIC4.17□□□□□ -1.74
COL4A1P02462 AL031121.1-201ENST00000406553 254 ntBASIC4.17□□□□□ -1.74
COL4A1P02462 USP12PY-201ENST00000427677 1064 ntBASIC4.17□□□□□ -1.74
COL4A1P02462 NANOGP6-201ENST00000429190 847 ntBASIC4.17□□□□□ -1.74
COL4A1P02462 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.17□□□□□ -1.74
COL4A1P02462 AL136126.1-201ENST00000473603 402 ntBASIC4.17□□□□□ -1.74
COL4A1P02462 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
COL4A1P02462 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
COL4A1P02462 FCF1P8-201ENST00000510322 597 ntBASIC4.17□□□□□ -1.74
COL4A1P02462 AC026333.2-201ENST00000542164 106 ntBASIC4.17□□□□□ -1.74
COL4A1P02462 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.17□□□□□ -1.74
COL4A1P02462 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.17□□□□□ -1.74
COL4A1P02462 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.17□□□□□ -1.74
COL4A1P02462 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.17□□□□□ -1.74
COL4A1P02462 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
COL4A1P02462 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.17□□□□□ -1.74
COL4A1P02462 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A1P02462 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.17□□□□□ -1.74
COL4A1P02462 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC4.17□□□□□ -1.74
COL4A1P02462 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.17□□□□□ -1.74
COL4A1P02462 AC018555.1-201ENST00000567548 1980 ntBASIC4.17□□□□□ -1.74
COL4A1P02462 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A1P02462 AC006504.1-201ENST00000562493 3666 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.16□□□□□ -1.74
COL4A1P02462 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A1P02462 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.16□□□□□ -1.74
COL4A1P02462 RPL23AP57-201ENST00000332361 466 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A1P02462 OR1AA1P-201ENST00000419597 916 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.16□□□□□ -1.74
COL4A1P02462 NPM1P39-201ENST00000449818 867 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 AC010469.1-201ENST00000463864 576 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.16□□□□□ -1.74
COL4A1P02462 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.16□□□□□ -1.74
COL4A1P02462 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.16□□□□□ -1.74
COL4A1P02462 AC015802.5-201ENST00000607478 399 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.16□□□□□ -1.74
COL4A1P02462 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A1P02462 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A1P02462 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A1P02462 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A1P02462 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A1P02462 MIR1289-1-201ENST00000408836 144 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 RPL23AP69-201ENST00000431134 458 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 MTCO1P45-201ENST00000431457 267 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.16□□□□□ -1.74
COL4A1P02462 AL356535.1-201ENST00000440335 398 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 RPS29P31-201ENST00000446147 164 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 FCF1P3-201ENST00000496394 590 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 HNRNPKP5-201ENST00000515300 253 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 RN7SKP289-201ENST00000517244 295 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 AC090136.1-201ENST00000520009 240 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.16□□□□□ -1.74
COL4A1P02462 AC011270.1-201ENST00000558606 583 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 AC233702.9-201ENST00000581528 203 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.16□□□□□ -1.74
COL4A1P02462 AL596275.2-204ENST00000641628 552 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 AL596275.2-206ENST00000641957 626 ntBASIC4.16□□□□□ -1.74
COL4A1P02462 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A1P02462 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
COL4A1P02462 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.15□□□□□ -1.75
COL4A1P02462 HMGN2P8-201ENST00000391458 268 ntBASIC4.15□□□□□ -1.75
COL4A1P02462 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.15□□□□□ -1.75
COL4A1P02462 ATP5C1P1-201ENST00000441945 895 ntBASIC4.15□□□□□ -1.75
COL4A1P02462 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.15□□□□□ -1.75
COL4A1P02462 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.15□□□□□ -1.75
COL4A1P02462 AC112198.1-201ENST00000505369 1220 ntBASIC4.15□□□□□ -1.75
COL4A1P02462 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.15□□□□□ -1.75
COL4A1P02462 DUXAP6-201ENST00000553858 601 ntBASIC4.15□□□□□ -1.75
COL4A1P02462 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.15□□□□□ -1.75
COL4A1P02462 AC020914.4-201ENST00000597690 277 ntBASIC4.15□□□□□ -1.75
COL4A1P02462 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.15□□□□□ -1.75
COL4A1P02462 MIR7851-201ENST00000610611 160 ntBASIC4.15□□□□□ -1.75
COL4A1P02462 AL157762.1-201ENST00000619612 415 ntBASIC4.15□□□□□ -1.75
COL4A1P02462 AC024341.1-201ENST00000526444 1552 ntBASIC4.15□□□□□ -1.75
COL4A1P02462 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
COL4A1P02462 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
COL4A1P02462 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A1P02462 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A1P02462 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL4A1P02462 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A1P02462 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A1P02462 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
COL4A1P02462 Y_RNA.111-201ENST00000363248 100 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms