Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 HMGB1P13-201ENST00000406019 642 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 RN7SKP202-201ENST00000410439 330 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 XKRYP4-201ENST00000414395 483 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 ARL2BPP3-201ENST00000421226 480 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN5O00501 FAM204CP-201ENST00000424489 642 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 OR4F13P-201ENST00000428478 931 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 AL445584.1-201ENST00000431451 330 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN5O00501 MTCO3P43-201ENST00000440974 771 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 AL513321.1-201ENST00000441175 761 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN5O00501 RPS17P13-201ENST00000448974 407 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 XKRYP5-201ENST00000449659 483 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 RN7SL542P-201ENST00000467147 294 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN5O00501 AL139099.1-201ENST00000497398 403 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN5O00501 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CLDN5O00501 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN5O00501 AC093853.1-201ENST00000515689 483 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 SCARNA14-201ENST00000516903 136 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 RNU1-45P-201ENST00000517191 141 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 AF186190.1-201ENST00000517470 480 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN5O00501 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN5O00501 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN5O00501 AL121594.4-201ENST00000556211 1196 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 NF1P5-201ENST00000588287 448 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.11□□□□□ -1.75
CLDN5O00501 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN5O00501 AC090912.3-201ENST00000609775 533 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 AP006248.2-201ENST00000623309 592 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 AL356863.1-201ENST00000623378 1080 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 BMS1P21-201ENST00000634565 365 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 AL118496.1-201ENST00000440201 1812 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN5O00501 AL049555.1-201ENST00000562834 1933 ntBASIC4.11□□□□□ -1.75
CLDN5O00501 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN5O00501 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN5O00501 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN5O00501 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CLDN5O00501 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN5O00501 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN5O00501 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN5O00501 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN5O00501 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN5O00501 U1.1-201ENST00000384101 164 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 HMGB1P10-201ENST00000395823 563 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 AL590290.1-201ENST00000405336 380 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 RNU2-17P-201ENST00000410290 190 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.1□□□□□ -1.75
CLDN5O00501 FAR1P1-201ENST00000427163 934 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 HMGB3P5-201ENST00000428894 612 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN5O00501 ELOCP18-201ENST00000434209 337 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 ELOCP8-201ENST00000439309 332 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 AL353093.1-201ENST00000441292 436 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 ELOCP15-201ENST00000442090 332 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN5O00501 RPL21P11-201ENST00000461458 483 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 AC020593.1-201ENST00000507399 299 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN5O00501 AC010285.3-201ENST00000511668 676 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 IGKV2-36-201ENST00000519999 223 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN5O00501 AC022695.1-201ENST00000522089 237 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 AC090819.1-201ENST00000523800 1111 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN5O00501 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN5O00501 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.1□□□□□ -1.75
CLDN5O00501 AC093014.1-201ENST00000548926 724 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 POLR2KP1-201ENST00000553226 168 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN5O00501 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN5O00501 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.1□□□□□ -1.75
CLDN5O00501 AC106785.3-201ENST00000564064 847 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 MIR1254-2-201ENST00000579553 63 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 OR4H6P-202ENST00000603819 340 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 AC004775.1-201ENST00000607389 753 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.1□□□□□ -1.75
CLDN5O00501 ZNF90P1-201ENST00000480493 1951 ntBASIC4.1□□□□□ -1.75
CLDN5O00501 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.1□□□□□ -1.75
CLDN5O00501 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN5O00501 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN5O00501 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CLDN5O00501 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN5O00501 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CLDN5O00501 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.09□□□□□ -1.75
CLDN5O00501 RN7SKP159-201ENST00000410657 292 ntBASIC4.09□□□□□ -1.75
CLDN5O00501 RNA5SP306-201ENST00000411087 107 ntBASIC4.09□□□□□ -1.75
CLDN5O00501 LINC01347-201ENST00000417964 355 ntBASIC4.09□□□□□ -1.75
CLDN5O00501 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN5O00501 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN5O00501 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.09□□□□□ -1.75
CLDN5O00501 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.09□□□□□ -1.75
CLDN5O00501 AC097499.1-201ENST00000444277 208 ntBASIC4.09□□□□□ -1.75
CLDN5O00501 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN5O00501 CYCSP53-201ENST00000455540 265 ntBASIC4.09□□□□□ -1.75
CLDN5O00501 AP000942.1-201ENST00000463969 747 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms