Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RPL21P75-201ENST00000396599 483 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL21P28-201ENST00000401418 483 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AL592114.1-201ENST00000403842 483 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RNA5SP36-201ENST00000410197 133 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC004987.3-201ENST00000413879 771 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AL096701.2-201ENST00000416920 238 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC241520.1-201ENST00000422654 1099 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AL390023.1-201ENST00000428836 262 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC006994.1-201ENST00000438212 839 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC092647.3-201ENST00000443044 633 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 SPRYD7P1-201ENST00000443861 570 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC069540.1-201ENST00000446320 988 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 TPT1P12-201ENST00000448968 492 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC091685.2-201ENST00000454924 864 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL21P11-201ENST00000461458 483 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL21P39-201ENST00000463605 483 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC091564.1-201ENST00000464563 479 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL23AP67-201ENST00000465341 474 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC146507.1-201ENST00000468335 354 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC011979.1-201ENST00000472300 483 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL21P93-201ENST00000480465 489 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RN7SL499P-201ENST00000481141 276 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC233702.1-201ENST00000482905 502 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC087190.1-201ENST00000484462 480 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC093591.1-201ENST00000491435 481 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL21P129-201ENST00000491732 478 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL21P16-201ENST00000495531 483 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL23AP55-201ENST00000498163 452 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 SNRPCP2-201ENST00000504370 475 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 IGBP1P5-201ENST00000507524 1000 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL7L1P4-201ENST00000513004 707 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC108064.1-201ENST00000513791 460 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 SNORD59.2-201ENST00000516873 68 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RN7SKP234-201ENST00000517173 224 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 IGHVIII-11-1-201ENST00000522733 267 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 ASB8-204ENST00000536071 568 ntTSL 4 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC090877.1-201ENST00000561418 344 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC055876.1-202ENST00000567053 138 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AL354984.3-201ENST00000604803 325 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 AC009779.8-202ENST00000607990 932 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 MIR6891-201ENST00000618788 93 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 MIR6853-201ENST00000619642 74 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 MIR6806-201ENST00000622141 64 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 MTND5P19-201ENST00000424872 1794 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RNA5SP443-201ENST00000363083 132 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 SNORA51.2-201ENST00000364595 132 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RNU6ATAC5P-201ENST00000388104 126 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RNA5SP492-201ENST00000411330 114 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RSU1P3-201ENST00000412878 835 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL21P112-201ENST00000434403 463 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL39P40-201ENST00000445481 146 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC140076.1-201ENST00000449897 361 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL36AP55-201ENST00000454114 305 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 OR7L1P-201ENST00000456181 380 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RNU6ATAC28P-201ENST00000459249 118 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL38P1-201ENST00000460914 211 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC109327.1-201ENST00000471666 403 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RPS27AP9-201ENST00000477681 438 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RN7SL184P-201ENST00000488308 297 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL7P24-201ENST00000493052 752 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 HSPD1P15-201ENST00000505573 1122 ntBASIC1.98□□□□□ -2.09
CHKB-CPT1BH3BT56 SSX6-203ENST00000509958 336 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms