Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 RPL6P5-201ENST00000445678 828 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 RAB9AP1-201ENST00000449393 573 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 FABP3P2-201ENST00000453169 399 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 HMGN1P8-201ENST00000463578 288 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 RNU7-143P-201ENST00000516781 65 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 DUXAP2-201ENST00000519198 589 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL391497.1-201ENST00000608671 547 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC104820.1-201ENST00000624183 307 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 HSPA8P17-201ENST00000427029 1382 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 OR5T3-201ENST00000303059 1023 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 RNA5SP119-201ENST00000362715 117 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 SNORA70.4-201ENST00000365509 134 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 RNU6-564P-201ENST00000410983 104 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC087650.1-201ENST00000431445 468 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 BTBD7P2-201ENST00000441962 620 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 PDSS1P2-201ENST00000449397 678 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 CYCSP53-201ENST00000455540 265 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 HMGN1P11-201ENST00000508668 303 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 RNA5SP164-201ENST00000516533 110 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 RNA5SP179-201ENST00000517284 121 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC067805.1-201ENST00000559344 470 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC009268.1-201ENST00000561352 1203 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL121772.2-201ENST00000614331 297 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL391261.4-201ENST00000616012 481 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC084757.4-201ENST00000616350 526 ntBASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.82□□□□□ -1.8
TMX2-CTNND1H3BSU7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 MARK2P15-201ENST00000432204 2186 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 SNORA63.1-201ENST00000362493 131 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 MIR3074-201ENST00000384885 81 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL138878.1-201ENST00000405131 347 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 RNU2-65P-201ENST00000410162 185 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 RHEBP3-201ENST00000411920 351 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 VN1R31P-201ENST00000417498 730 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 Z97055.1-201ENST00000419730 712 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 NPM1P34-201ENST00000428821 893 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 RPS11P1-201ENST00000451072 473 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL645939.1-201ENST00000453429 797 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 MTND3P4-201ENST00000453537 303 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC006499.5-201ENST00000505037 514 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 MTND2P31-201ENST00000512602 616 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 IGKV2-38-201ENST00000517443 247 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC026403.1-201ENST00000518938 295 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 DEFB109D-201ENST00000529497 240 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AP000619.3-201ENST00000535634 1127 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 RFPL1S-203ENST00000539579 330 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms