Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RPL7P42-201ENST00000481005 679 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 RPL23AP72-201ENST00000492447 435 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC093870.1-201ENST00000506837 213 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC018797.3-201ENST00000513388 1241 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC093677.1-201ENST00000514414 678 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC107953.1-201ENST00000522216 297 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AP001858.2-201ENST00000536213 601 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 MIR378H-201ENST00000579966 83 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 RPS4XP21-201ENST00000603814 750 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 HSPE1P14-201ENST00000605812 302 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 RN7SL261P-201ENST00000613441 282 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC018628.1-201ENST00000624147 3819 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC090617.10-201ENST00000624308 134 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC099654.15-201ENST00000639802 509 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC022325.1-201ENST00000502748 2199 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 OR4G1P-203ENST00000641984 1631 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 MTND4P35-201ENST00000604257 1375 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 RNU1-84P-201ENST00000365447 164 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 RPS15AP30-201ENST00000420976 390 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AL354766.1-201ENST00000423396 542 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC006548.1-201ENST00000427470 102 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 RPS15AP9-201ENST00000439856 381 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 CACYBPP2-201ENST00000453625 678 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 Y_RNA.632-201ENST00000459189 102 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC233702.1-201ENST00000482905 502 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC124945.1-201ENST00000485133 188 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC097486.1-201ENST00000515331 210 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 RNU6-1314P-201ENST00000517139 104 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 BTF3P12-201ENST00000519620 469 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 IGHV4-55-201ENST00000520889 368 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AP005597.4-201ENST00000526762 229 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 BNIP3P6-201ENST00000549284 499 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC020661.2-201ENST00000560114 134 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.32□□□□□ -1.56
SHISA3A0PJX4 RPL23AP92-201ENST00000603609 255 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AP001437.1-201ENST00000608783 456 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AL133215.3-201ENST00000609801 448 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AL355472.4-201ENST00000610233 626 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 AL354950.2-201ENST00000617939 290 ntBASIC5.32□□□□□ -1.56
SHISA3A0PJX4 MIR7854-201ENST00000620068 65 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms