Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AL590290.1-201ENST00000405336 380 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 VDAC1P9-201ENST00000412766 841 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 AC064862.4-201ENST00000442180 334 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 RPL35AP28-201ENST00000459730 331 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 RPS20P21-201ENST00000466859 343 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 AL049874.2-201ENST00000492636 288 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 RNU2-53P-201ENST00000516257 147 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 AC015818.6-201ENST00000584274 634 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 ATP1B3P1-201ENST00000605365 821 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 ATM-230ENST00000640388 578 ntTSL 5 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 UG0898H09-202ENST00000623646 7040 ntBASIC8.6□□□□□ -1.03
PHF8Q9UPP1 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.6□□□□□ -1.03
PHF8Q9UPP1 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 CDC27P3-201ENST00000635418 1910 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 RNU6-874P-201ENST00000362390 105 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 SNORD113-7-201ENST00000363762 77 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 RNU6-744P-201ENST00000365557 107 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 RNU6-1316P-201ENST00000384242 108 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 RNU6-601P-201ENST00000384540 107 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 MIR541-201ENST00000401360 84 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 MTCO2P33-201ENST00000402100 465 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 MIR1178-201ENST00000408396 91 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 RNA5SP156-201ENST00000410250 110 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 BX323845.3-201ENST00000428215 527 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 AC002381.1-201ENST00000447049 280 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 MORF4-201ENST00000447135 971 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 AL445665.1-202ENST00000452436 324 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 ALDH7A1P3-201ENST00000492517 345 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 EEF1A1P25-201ENST00000495704 1267 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 AL136038.1-201ENST00000497246 351 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 AC106800.3-201ENST00000511389 308 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 Y_RNA.661-201ENST00000516003 99 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 Y_RNA.710-201ENST00000516975 110 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 Y_RNA.721-201ENST00000517207 102 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 IGKV1D-22-201ENST00000518953 324 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 OLR1-210ENST00000544577 924 ntTSL 5 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 AC079600.1-201ENST00000550326 297 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 AC007225.2-201ENST00000562529 256 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 BBIP1P1-201ENST00000602999 279 ntBASIC8.59□□□□□ -1.03
PHF8Q9UPP1 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHF8Q9UPP1 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.59□□□□□ -1.04
PHF8Q9UPP1 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.04
PHF8Q9UPP1 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 NLRP3P1-201ENST00000622303 1785 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 SAMMSON-210ENST00000641260 1308 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AC022325.1-201ENST00000502748 2199 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms