Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 CKAP2P1-201ENST00000555477 2049 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTN3Q9P232 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTN3Q9P232 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTN3Q9P232 SAMMSON-210ENST00000641260 1308 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 SNORD81.2-201ENST00000365153 76 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 Y_RNA.431-201ENST00000384086 102 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 RNU6-373P-201ENST00000411247 98 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 AC211486.3-201ENST00000412694 621 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 AL357752.1-201ENST00000412817 349 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AC104837.2-201ENST00000427236 424 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 OR51AB1P-201ENST00000429046 620 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 AC126120.1-201ENST00000431082 470 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 RPS3AP54-201ENST00000435535 734 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 AP000936.3-201ENST00000438127 255 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 AL663074.2-201ENST00000440621 479 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 AC073909.1-201ENST00000447112 999 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 SETP20-201ENST00000457046 852 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 NXT1P1-201ENST00000458481 316 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 RNU7-136P-201ENST00000458819 69 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 RNU6-488P-201ENST00000515918 99 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 SNORA70.20-201ENST00000516848 126 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 SNORA81.2-201ENST00000516868 170 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AL389895.1-201ENST00000554127 252 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 AL049779.3-201ENST00000557141 606 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AC011468.4-201ENST00000603942 409 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 FAM27E4-201ENST00000605259 342 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AC068722.2-201ENST00000618734 544 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 AC127024.6-201ENST00000621598 424 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 AL732618.1-201ENST00000623251 301 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTN3Q9P232 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.37□□□□□ -1.39
CNTN3Q9P232 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNTN3Q9P232 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTN3Q9P232 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNTN3Q9P232 CASC19-204ENST00000641001 2055 ntBASIC6.37□□□□□ -1.39
CNTN3Q9P232 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTN3Q9P232 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTN3Q9P232 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC007114.2-201ENST00000576014 4281 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNTN3Q9P232 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC092070.2-203ENST00000598377 3644 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC010928.1-201ENST00000592477 1447 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNTN3Q9P232 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNTN3Q9P232 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 MIR375-201ENST00000362103 64 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 RNU6-451P-201ENST00000362921 107 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 SNORA17A-201ENST00000391185 133 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 RPL23AP17-201ENST00000401064 499 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 RPS20P2-201ENST00000402520 389 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 MRPL42P2-201ENST00000403169 426 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 AL121835.1-201ENST00000404250 354 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 RN7SKP29-201ENST00000410957 272 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 MRPL53P1-201ENST00000414323 319 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC048351.1-201ENST00000420064 602 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 AL353193.1-201ENST00000421444 268 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 HMGB3P9-201ENST00000441799 583 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 AL136380.1-201ENST00000447970 162 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 RPL31P15-201ENST00000449770 338 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC083798.1-201ENST00000472671 131 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 RPS17P15-201ENST00000475609 349 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms