Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL20A1Q9P218 CBX1P1-201ENST00000440184 427 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL20A1Q9P218 RPL23AP76-201ENST00000441860 458 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 RPL21P133-201ENST00000443666 476 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 TDGF1P1-201ENST00000445734 527 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 AL034418.1-201ENST00000448675 860 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 RPL10P17-201ENST00000453852 316 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 RN7SL385P-201ENST00000468873 276 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC011276.1-201ENST00000469688 323 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC048346.1-201ENST00000510247 144 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC008494.2-201ENST00000514544 370 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 RNU6-347P-201ENST00000516658 105 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 HIGD1AP6-201ENST00000521833 279 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC079171.1-201ENST00000568788 914 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC002400.1-201ENST00000569310 726 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 AL353778.1-201ENST00000603149 408 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC005191.1-201ENST00000603950 358 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC091488.1-201ENST00000604239 660 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC009220.3-201ENST00000604318 586 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AL390816.3-201ENST00000604527 1066 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AL133507.1-201ENST00000605269 557 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC080013.3-201ENST00000606839 578 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC023158.2-201ENST00000614876 543 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC124312.6-202ENST00000623624 418 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL20A1Q9P218 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 AC097063.1-201ENST00000426714 1797 ntBASIC5.21□□□□□ -1.57
COL20A1Q9P218 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.21□□□□□ -1.57
COL20A1Q9P218 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL20A1Q9P218 AC005539.1-201ENST00000443768 1479 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AL136164.3-201ENST00000624429 3978 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL20A1Q9P218 AL118496.1-201ENST00000440201 1812 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL20A1Q9P218 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL20A1Q9P218 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL20A1Q9P218 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 RAP1BP1-201ENST00000412709 553 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 NRBF2P2-201ENST00000413087 861 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC009965.2-201ENST00000425328 970 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 NPM1P24-201ENST00000428039 894 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 MTND1P32-201ENST00000433043 938 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 RPS26P40-201ENST00000435209 294 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 TPT1P12-201ENST00000448968 492 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 RPL21P134-201ENST00000453468 483 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 ISCUP1-201ENST00000454451 448 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL20A1Q9P218 WBP1LP4-201ENST00000505043 344 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 MTCYBP16-201ENST00000509187 1129 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC116353.3-201ENST00000511215 249 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC010486.3-201ENST00000511602 785 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC109445.1-201ENST00000512356 383 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC008837.2-201ENST00000513076 418 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL20A1Q9P218 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC004217.3-201ENST00000551552 878 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC114878.2-201ENST00000604863 1251 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AL451074.6-201ENST00000608512 729 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 AL360219.1-201ENST00000610230 366 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 MLECP1-201ENST00000615893 709 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC011944.2-201ENST00000624440 683 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 MIR4278-201ENST00000636094 69 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 AC125257.1-201ENST00000560400 2930 ntBASIC5.21□□□□□ -1.58
COL20A1Q9P218 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms