Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL031663.1-201ENST00000437445 219 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 RPS29P22-201ENST00000472363 168 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 RNA5SP208-201ENST00000516156 78 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 RN7SKP209-201ENST00000516888 304 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 AC008802.1-201ENST00000519121 791 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 OR4U1P-201ENST00000554958 912 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 AL121576.1-201ENST00000556055 276 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 AC107905.1-201ENST00000616204 426 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 AC007342.8-201ENST00000623278 678 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 AL139811.1-201ENST00000424779 2299 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 RNA5SP130-201ENST00000364431 114 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 RPS4XP9-201ENST00000405151 780 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 AL691449.1-201ENST00000426570 421 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 Z85994.2-201ENST00000434327 452 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 CBX1P4-201ENST00000439415 457 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 AL627224.1-201ENST00000448334 444 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 PPIAP15-201ENST00000479662 484 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 RAC1P2-201ENST00000511164 579 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 AC067852.4-201ENST00000590314 478 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 AC023043.4-201ENST00000612081 449 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 CASC19-261ENST00000641853 1638 ntBASIC3.62□□□□□ -1.83
VAPAQ9P0L0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VAPAQ9P0L0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AL353743.4-201ENST00000422653 1547 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 RNU1-87P-201ENST00000363727 170 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 RNU4-6P-201ENST00000410804 122 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC009480.2-201ENST00000422916 432 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 HMGB3P5-201ENST00000428894 612 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AL365396.1-201ENST00000430854 671 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 Z74696.2-201ENST00000436514 498 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 SNORA71B-202ENST00000439232 272 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 RPL21P11-201ENST00000461458 483 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC007537.2-201ENST00000472093 511 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 RN7SL459P-201ENST00000481078 302 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC106806.2-201ENST00000509365 500 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 IGKV2D-10-201ENST00000520194 281 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC138701.1-201ENST00000524329 714 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC106785.3-201ENST00000564064 847 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC020910.2-201ENST00000603635 610 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC008745.1-201ENST00000604064 271 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 ARF4P1-201ENST00000605447 541 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC012557.1-201ENST00000607115 611 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC011472.4-201ENST00000615848 491 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC079684.1-201ENST00000621405 437 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 C2orf27A-204ENST00000623058 969 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 OR6C71P-202ENST00000641886 1107 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 RNF6P1-201ENST00000444889 1784 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 AC073429.2-201ENST00000569694 1444 ntBASIC3.61□□□□□ -1.83
VAPAQ9P0L0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VAPAQ9P0L0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms