Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC053481.2-202ENST00000582394 1500 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 SAGE4P-201ENST00000442271 3381 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 CASC19-261ENST00000641853 1638 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AP000542.2-201ENST00000623199 6179 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AC025031.4-201ENST00000621248 3271 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AC139713.2-214ENST00000642059 1811 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AC092435.4-201ENST00000623012 4159 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AC067945.1-201ENST00000342609 618 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 SNORA11F-201ENST00000408237 128 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AC096533.1-201ENST00000411645 353 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 RPL23AP52-201ENST00000439311 478 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 ABCF2P2-201ENST00000450549 296 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 MTND2P39-201ENST00000457230 764 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 MTND2P28-201ENST00000457540 1044 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 RPL7P22-201ENST00000466005 733 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 RN7SL738P-201ENST00000470264 297 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 PRDX3P4-201ENST00000470828 747 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 RNU6-202P-201ENST00000515998 96 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AC104417.1-201ENST00000523974 751 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 RN7SL52P-201ENST00000584271 284 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 AP000255.1-201ENST00000610276 676 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 RN7SL722P-201ENST00000617780 284 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 RN7SL565P-201ENST00000618246 284 ntBASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
BLOC1S4Q9NUP1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 RNA5SP447-201ENST00000363749 119 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 U3.22-201ENST00000391120 215 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 AL355143.1-201ENST00000407101 841 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 AC233981.1-201ENST00000423224 461 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 snoU13.1-201ENST00000459157 104 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 RN7SL98P-201ENST00000462271 300 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 AC013356.1-201ENST00000489027 564 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 ARL4AP1-201ENST00000503220 705 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 MTND3P3-201ENST00000505004 126 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 CDH12P4-201ENST00000517835 295 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 CDH12P3-201ENST00000517935 295 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 CDH12P1-201ENST00000518435 295 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 MTND2P26-201ENST00000528255 1029 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 AL352979.3-201ENST00000553515 247 ntBASIC4.85□□□□□ -1.63
BLOC1S4Q9NUP1 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms