Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 RNU6-984P-201ENST00000363236 109 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 RNU6-621P-201ENST00000364752 109 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC069218.2-201ENST00000411665 344 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 USP9YP26-201ENST00000421008 661 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC004074.1-201ENST00000421810 1063 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 UBE2V1P1-201ENST00000430836 445 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 UBE2D3P1-201ENST00000436669 444 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 MTCO1P48-201ENST00000448024 1096 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC073850.1-201ENST00000449243 255 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 RSL24D1P3-201ENST00000449255 495 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 BX842559.2-201ENST00000451418 605 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AL445433.1-201ENST00000457507 257 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 NCOR1P1-202ENST00000486162 291 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC109462.1-201ENST00000491087 368 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 RNY4P37-201ENST00000516225 96 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 HMGB1P19-201ENST00000517578 577 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC022790.1-201ENST00000522872 204 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 LSM6P2-201ENST00000552208 177 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 MIR4999-201ENST00000585029 91 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 Z99497.2-201ENST00000603634 310 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 SNORD91B-202ENST00000608459 222 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AL136981.2-201ENST00000617319 734 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 AC120349.2-201ENST00000625002 298 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 MTND5P28-201ENST00000438005 1594 ntBASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
NECTIN3Q9NQS3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AP000526.1-201ENST00000603308 1388 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 OR5BR1P-201ENST00000524992 1330 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 RNU6-657P-201ENST00000383904 107 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 MIR649-201ENST00000384843 97 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AL390316.1-201ENST00000406279 553 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AC009518.2-201ENST00000418056 731 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AC093162.1-201ENST00000419682 124 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AL022400.1-201ENST00000423946 935 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 RPL30P3-201ENST00000424262 333 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AC022795.1-201ENST00000473808 480 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 RPL7AP6-201ENST00000477943 801 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AC004453.1-201ENST00000487895 408 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 KLRA1P-201ENST00000503499 986 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AC004980.4-201ENST00000513375 203 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 HNRNPKP5-201ENST00000515300 253 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 OR5AZ1P-201ENST00000527448 943 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 MTCYBP28-201ENST00000566728 1132 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AC087763.1-201ENST00000603391 286 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AC005962.2-201ENST00000611427 652 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 MIR7155-201ENST00000615925 56 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 MIR3974-201ENST00000637126 96 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms