Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 MIR1254-2-201ENST00000579553 63 ntBASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 AC133552.5-201ENST00000604266 540 ntBASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 AL392112.1-201ENST00000605115 829 ntBASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 AL365400.2-201ENST00000605604 902 ntBASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 AL583856.2-201ENST00000606298 543 ntBASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 AC010424.2-201ENST00000607594 443 ntBASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 AL138478.1-201ENST00000612252 832 ntBASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 MIR6716-201ENST00000613413 80 ntBASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 AC010975.3-201ENST00000618727 978 ntBASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 AC005086.4-201ENST00000623065 213 ntBASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.61□□□□□ -1.67
POLR1BQ9H9Y6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 DHX9P1-201ENST00000436565 3076 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 XPOTP1-201ENST00000443317 2398 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 OR56B2P-202ENST00000641377 2453 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 SNORA73.1-201ENST00000363107 205 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 MIR195-201ENST00000385194 87 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AL079342.2-201ENST00000403367 482 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 RPL21P108-201ENST00000413857 481 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AL449283.1-202ENST00000418249 604 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 IPMKP1-201ENST00000425988 855 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 RPL37P1-201ENST00000432310 284 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 CEACAMP1-201ENST00000434624 1035 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AL450023.3-201ENST00000440592 271 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AC004865.1-201ENST00000442276 1003 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AC239367.2-201ENST00000447309 705 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 RPL21P71-201ENST00000465598 459 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 RN7SL817P-201ENST00000480777 288 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AC126121.1-201ENST00000482313 553 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 NIP7P2-201ENST00000485801 544 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 RPS4XP18-201ENST00000495480 763 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 FTH1P24-201ENST00000503502 462 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AC113420.1-201ENST00000507903 571 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 PGBD4P4-201ENST00000509673 613 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 RPL7L1P13-201ENST00000511702 739 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AC023632.1-201ENST00000518463 375 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AC022882.1-201ENST00000532142 501 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AP000238.1-201ENST00000608759 426 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AL157392.4-201ENST00000609756 345 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AL592148.2-201ENST00000612210 372 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AC087821.2-201ENST00000637086 450 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 DDX18P5-201ENST00000534547 1306 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 MAPK10-303ENST00000641324 3959 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 SAGE2P-201ENST00000420011 2126 ntBASIC4.6□□□□□ -1.67
POLR1BQ9H9Y6 AC087190.4-201ENST00000574616 8334 ntBASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 OR51H2P-202ENST00000641424 3046 ntBASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 RNA5SP28-201ENST00000363841 119 ntBASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 RNA5SP372-201ENST00000390836 115 ntBASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 LRRC37BP1-201ENST00000398851 714 ntBASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 PRRC2CP1-201ENST00000404428 159 ntBASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 HDGFP1-201ENST00000405943 252 ntBASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 ATG4AP1-201ENST00000416893 538 ntBASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 Z75741.2-201ENST00000417272 1167 ntBASIC4.59□□□□□ -1.67
POLR1BQ9H9Y6 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms