Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 XPOTP1-201ENST00000443317 2398 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 RNY3P9-201ENST00000384727 106 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 ATP5F1P2-201ENST00000398143 760 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 Z98745.1-201ENST00000402553 494 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 EXTL2P1-201ENST00000446218 416 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AL591363.1-201ENST00000450091 483 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 HMGN3P1-201ENST00000453847 193 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC090142.1-201ENST00000465776 462 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 MTCYBP16-201ENST00000509187 1129 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC087808.1-201ENST00000520501 361 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC010198.2-201ENST00000550612 259 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC087465.1-201ENST00000560574 245 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC018552.3-201ENST00000567416 561 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AP005262.1-201ENST00000582646 997 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC011477.5-201ENST00000586571 259 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 VN1R78P-201ENST00000597393 564 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 ZYXP1-201ENST00000617638 118 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 RNA5SP196-201ENST00000625967 102 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 ADAM5-202ENST00000399789 1942 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 AC104118.1-201ENST00000607625 1589 ntBASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.67□□□□□ -1.5
RTFDC1Q9BY42 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 RNU6-1066P-201ENST00000363573 105 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 SNORD65.1-201ENST00000390889 71 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 HNRNPDP2-201ENST00000406475 478 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 RPL31P52-201ENST00000407532 367 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 SETP15-201ENST00000412724 337 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 TMSB10P2-201ENST00000416049 131 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AC233981.1-201ENST00000423224 461 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AL158073.1-201ENST00000426848 1104 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 USP9YP11-201ENST00000427537 717 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 RPL37P1-201ENST00000432310 284 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 SEPT7P5-201ENST00000434048 306 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 RPL35AP21-201ENST00000437667 333 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 CYCSP24-201ENST00000445119 316 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 USP9YP25-201ENST00000457708 443 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AC245028.2-201ENST00000458673 253 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 RPL5P24-201ENST00000463742 885 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 RPL7P19-201ENST00000469948 618 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AC091167.1-201ENST00000492017 396 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AC005351.1-201ENST00000511152 786 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 RFPL4AP5-201ENST00000514977 504 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 MRPS36P3-201ENST00000519284 130 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 FKBP1BP1-201ENST00000553366 325 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 MTCYBP27-201ENST00000555160 670 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 PSMB7P1-201ENST00000556349 514 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AC106785.1-201ENST00000565935 262 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AC145350.1-201ENST00000567426 208 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AC009220.3-201ENST00000604318 586 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 AC243756.2-201ENST00000618406 463 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 MIR1322-201ENST00000638013 71 ntBASIC5.66□□□□□ -1.5
RTFDC1Q9BY42 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms