Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 CYCSP40-201ENST00000575927 294 ntBASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 BNIP3P24-201ENST00000593398 557 ntBASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 AC006539.2-201ENST00000601729 572 ntBASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 AC018638.7-201ENST00000605836 1114 ntBASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 AC010857.1-201ENST00000606398 594 ntBASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 AC116651.1-201ENST00000609724 556 ntBASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 AC131238.1-201ENST00000617135 328 ntBASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 CU459211.1-201ENST00000635667 749 ntBASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 AC109780.1-201ENST00000451768 1344 ntBASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RAB40AQ8WXH6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
RAB40AQ8WXH6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RAB40AQ8WXH6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.4□□□□□ -1.7
RAB40AQ8WXH6 AC000123.3-201ENST00000624029 4975 ntBASIC4.4□□□□□ -1.7
RAB40AQ8WXH6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAB40AQ8WXH6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RAB40AQ8WXH6 MAPK10-304ENST00000641341 3984 ntBASIC4.4□□□□□ -1.7
RAB40AQ8WXH6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAB40AQ8WXH6 RNU6-984P-201ENST00000363236 109 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 RNA5SP507-201ENST00000363603 121 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 RNA5SP90-201ENST00000364801 99 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 ATP5F1P3-201ENST00000397213 657 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AL589647.1-201ENST00000402485 466 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC069218.2-201ENST00000411665 344 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 DPPA2P3-201ENST00000411853 655 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 MTND2P18-201ENST00000419962 1030 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 MFSD13B-201ENST00000420133 1290 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 CKS1BP6-201ENST00000424932 240 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC005033.1-201ENST00000428904 813 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 RPS25P9-201ENST00000435591 252 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 CEACAMP9-201ENST00000442990 513 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AL133217.1-201ENST00000450980 425 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC104634.1-201ENST00000452720 462 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 IFNWP4-201ENST00000453148 294 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AL389915.2-201ENST00000454576 441 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 RPS20P21-201ENST00000466859 343 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC108751.2-201ENST00000469993 231 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 NIP7P2-201ENST00000485801 544 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 OR4G11P-201ENST00000492842 939 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC005726.1-201ENST00000494679 427 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 ARL4AP1-201ENST00000503220 705 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 SNRPCP2-201ENST00000504370 475 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC093534.1-201ENST00000504977 132 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 HMGB1P28-201ENST00000507778 552 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 RNA5SP464-201ENST00000516251 108 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC005868.1-201ENST00000536421 331 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC006270.3-201ENST00000605967 1036 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC097065.2-201ENST00000608159 533 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AL139418.1-201ENST00000613613 177 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 RPSAP73-201ENST00000614820 330 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC068722.2-201ENST00000618734 544 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AC117529.2-201ENST00000512159 2068 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 MAPK10-286ENST00000641208 8747 ntBASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RAB40AQ8WXH6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RAB40AQ8WXH6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RAB40AQ8WXH6 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RAB40AQ8WXH6 AL359922.3-201ENST00000624779 1670 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms