Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC105402.2-201ENST00000438503 358 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AL356535.1-201ENST00000440335 398 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 CEACAMP9-201ENST00000442990 513 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 MTND2P8-201ENST00000450555 1025 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 C1DP3-201ENST00000455013 423 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AC006463.2-201ENST00000473326 348 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AC010342.1-201ENST00000514047 877 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 IGKV2-23-201ENST00000518729 323 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 IGKV2D-10-201ENST00000520194 281 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 MIR3138-201ENST00000585238 82 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AC090525.3-201ENST00000605601 189 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 MIR6798-201ENST00000612887 67 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 MIR7973-1-201ENST00000614683 76 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AC011472.4-201ENST00000615848 491 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 MIR8059-201ENST00000620427 81 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 BDP1P-201ENST00000582658 1990 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 RNA5SP399-201ENST00000364003 117 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 RNU6-244P-201ENST00000391028 104 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 HMGB3P19-201ENST00000403971 560 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 RN7SKP33-201ENST00000410942 340 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 TPT1P2-201ENST00000413105 503 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AC008065.1-201ENST00000428525 348 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 MTCO1P45-201ENST00000431457 267 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 KCTD9P3-201ENST00000434597 1169 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 RANP8-201ENST00000444720 713 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 TPT1P13-201ENST00000449760 499 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AC007537.2-201ENST00000472093 511 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 RPL7P24-201ENST00000493052 752 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 RNU6-1308P-201ENST00000516817 103 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 HIGD1AP5-201ENST00000529959 259 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 CYCSP29-201ENST00000533731 318 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 RN7SL600P-201ENST00000581811 299 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AC006116.5-201ENST00000591936 559 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 MRPS35P3-201ENST00000603189 709 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AC005229.3-201ENST00000603438 323 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AP003392.5-201ENST00000607857 415 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AC005021.1-201ENST00000608730 355 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 AC006504.1-201ENST00000562493 3666 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 IPO8P1-201ENST00000455509 3109 ntBASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLHC1Q8NHS4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 HMGB1P10-201ENST00000395823 563 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 RPL7AP73-201ENST00000413490 353 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 TBCAP1-201ENST00000436520 327 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 HMGB1P37-201ENST00000439613 609 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 H2AFZP6-201ENST00000444403 394 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AL157827.1-201ENST00000447622 132 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms