Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AC112198.2-201ENST00000426589 6996 ntBASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 RNU6-301P-201ENST00000384277 107 ntBASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AC244033.1-201ENST00000426826 870 ntBASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AC008065.1-201ENST00000428525 348 ntBASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 RPL7P28-201ENST00000437739 740 ntBASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AP002371.1-201ENST00000463604 433 ntBASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AP005262.1-201ENST00000582646 997 ntBASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AC006539.2-201ENST00000601729 572 ntBASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AP000255.1-201ENST00000610276 676 ntBASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AC233263.6-201ENST00000631132 1963 ntBASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.82□□□□□ -1.64
COL22A1Q8NFW1 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 UBE3AP2-201ENST00000429033 2259 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 RNU1-140P-201ENST00000365040 165 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 RN7SKP53-201ENST00000411337 315 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 AC010655.1-201ENST00000449336 292 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 NPM1P29-201ENST00000483112 803 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 AC012123.2-201ENST00000485809 248 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 AC025445.1-201ENST00000502728 300 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 AC023141.12-201ENST00000512399 199 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 RNA5SP154-201ENST00000516193 111 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 AL121594.4-201ENST00000556211 1196 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 MIR4276-201ENST00000584832 70 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 AC087468.1-201ENST00000604365 630 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 ZNF807-201ENST00000328088 1707 ntBASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL22A1Q8NFW1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 BX323014.1-201ENST00000412876 237 ntBASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 SDCBPP2-201ENST00000424643 885 ntBASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 AC107083.1-201ENST00000439643 279 ntBASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 AC023161.2-201ENST00000551218 780 ntBASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 TRAV15-201ENST00000556680 249 ntBASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 AL390816.3-201ENST00000604527 1066 ntBASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 AL162274.2-201ENST00000614406 332 ntBASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 MAPK10-303ENST00000641324 3959 ntBASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL22A1Q8NFW1 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 AL139095.1-201ENST00000404326 391 ntBASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 HMGB3P20-201ENST00000417997 600 ntBASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 AC092747.2-201ENST00000545069 983 ntBASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 MTND2P17-201ENST00000550281 688 ntBASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 AC093732.2-201ENST00000607950 274 ntBASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 U4.6-201ENST00000621618 127 ntBASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 AC093909.5-201ENST00000621839 1799 ntBASIC4.79□□□□□ -1.64
COL22A1Q8NFW1 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms