Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 PCNAP1-202ENST00000595299 752 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC092106.3-201ENST00000611308 722 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC015804.1-201ENST00000622935 435 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AL596275.2-204ENST00000641628 552 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AL596275.2-206ENST00000641957 626 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC126755.2-208ENST00000327792 462 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC138969.1-213ENST00000331436 462 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 MTND4P13-201ENST00000402078 1023 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AL590084.1-201ENST00000407885 387 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 RNU6-272P-201ENST00000411028 104 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 TMBIM7P-201ENST00000418074 855 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 RPL18P10-201ENST00000425606 538 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 RPL23AP1-201ENST00000428990 471 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 RPS26P40-201ENST00000435209 294 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 MTCO2P20-201ENST00000437339 673 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 Z77249.1-201ENST00000444622 1175 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC079776.3-201ENST00000450665 370 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 MTND2P28-201ENST00000457540 1044 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 USP9YP25-201ENST00000457708 443 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC020890.1-201ENST00000491837 504 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 BOLA3P3-201ENST00000505182 232 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 OR4C2P-201ENST00000530855 1064 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC004217.3-201ENST00000551552 878 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC090888.2-201ENST00000559765 1144 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AADACP1-206ENST00000561502 1193 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 MIR4284-201ENST00000578924 81 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 RPL12P25-202ENST00000598100 674 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC231759.1-201ENST00000616455 597 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AP001005.3-201ENST00000622049 129 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC090017.1-201ENST00000548612 1779 ntBASIC4.32□□□□□ -1.72
BEST3Q8N1M1 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BEST3Q8N1M1 AC015813.6-201ENST00000624409 5808 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 ZNF137P-201ENST00000456718 1920 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 ZFRP1-201ENST00000457579 2970 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 DDX18P5-201ENST00000534547 1306 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms