Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC110716.2-201ENST00000563865 3945 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 RN7SKP69-201ENST00000365390 305 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 RHOT1P2-201ENST00000366423 333 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 SNORA20.2-201ENST00000383922 131 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 Y_RNA.483-201ENST00000384380 101 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 RNU1-46P-201ENST00000384425 164 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 SNORA11B-201ENST00000408175 129 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 MIR320C1-201ENST00000408566 88 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 RN7SKP206-201ENST00000410823 293 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 RGS17P1-201ENST00000423358 553 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC019097.1-201ENST00000424783 735 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC023141.3-201ENST00000436698 278 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 ATP5LP2-201ENST00000440646 311 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 FTH1P25-201ENST00000447665 469 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 RPL26P28-201ENST00000451325 435 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC006512.1-201ENST00000468816 291 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 RN7SL714P-201ENST00000487050 298 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 RN7SL101P-201ENST00000496350 279 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 RNA5SP340-201ENST00000517132 107 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC012400.1-201ENST00000518452 381 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC131281.1-201ENST00000522984 164 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC022080.3-201ENST00000544433 482 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 IMMP1LP2-201ENST00000552954 492 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 BCRP9-201ENST00000605312 388 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC092608.2-201ENST00000624427 218 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC073342.2-201ENST00000595842 1800 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 ERCC6-202ENST00000374127 1782 ntBASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AL049555.1-201ENST00000562834 1933 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 RNU6-1252P-201ENST00000363054 104 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 RNA5SP510-201ENST00000364697 99 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 RNU4-66P-201ENST00000365199 138 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 RNU6-890P-201ENST00000384121 107 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 Y_RNA.493-201ENST00000384422 102 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 Y_RNA.496-201ENST00000384444 101 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 MIR16-1-201ENST00000385271 89 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AL031985.1-201ENST00000392713 418 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 MIR1302-6-201ENST00000408466 90 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 GJA6P-201ENST00000415117 1042 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 SLC35E1P1-201ENST00000419313 864 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 RPA2P2-201ENST00000419698 796 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC096775.1-201ENST00000437724 448 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 PRPS1P1-201ENST00000445305 876 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC098847.1-201ENST00000473094 348 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 TRBVA-201ENST00000498804 316 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC097473.1-201ENST00000508142 408 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC002456.2-201ENST00000509356 380 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 RNU6-1003P-201ENST00000517099 105 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 SUMO2P20-201ENST00000520803 283 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms