Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.96□□□□□ -1.78
CDKL3Q8IVW4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDKL3Q8IVW4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDKL3Q8IVW4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDKL3Q8IVW4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC138393.1-206ENST00000540997 1886 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AL121657.1-201ENST00000327215 531 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 RPL32P3-201ENST00000359025 275 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC068538.1-201ENST00000376856 336 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 SNORD65-201ENST00000391079 73 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AMD1P2-201ENST00000412936 992 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 ANP32BP2-201ENST00000454525 545 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 OR7L1P-201ENST00000456181 380 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC026979.1-201ENST00000492525 396 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC012170.1-201ENST00000495139 359 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 SUMO2P20-201ENST00000520803 283 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC092851.1-201ENST00000535964 478 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC091515.1-201ENST00000548110 679 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AGGF1P8-201ENST00000562979 1000 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC120057.2-201ENST00000571520 271 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC027281.1-201ENST00000574178 758 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC115621.1-201ENST00000604653 858 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AL137849.1-201ENST00000604767 169 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC010680.4-201ENST00000605334 543 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 BRDTP1-201ENST00000605735 677 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC006338.2-201ENST00000616864 791 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 MIR6500-201ENST00000622700 86 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AF001550.2-201ENST00000636643 217 ntBASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.95□□□□□ -1.78
CDKL3Q8IVW4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AC066616.2-201ENST00000559334 1481 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 RNU1-18P-201ENST00000363062 164 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 SNORA70.2-201ENST00000364506 135 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 MIR124-3-201ENST00000384866 87 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AC005229.2-201ENST00000456995 399 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 RN7SL93P-201ENST00000463035 293 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AC010307.1-201ENST00000467206 836 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 RN7SKP209-201ENST00000516888 304 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 OR4C2P-201ENST00000530855 1064 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AL590410.1-201ENST00000617925 333 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 AC092159.4-201ENST00000624944 550 ntBASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDKL3Q8IVW4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDKL3Q8IVW4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms