Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 PPIAP17-201ENST00000438507 471 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 RPS27AP15-201ENST00000447672 466 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 RPL7L1P1-201ENST00000448259 785 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AL589880.1-201ENST00000448271 287 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 PRDX3P4-201ENST00000470828 747 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC022034.3-201ENST00000471393 478 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 GAPDHP39-201ENST00000481866 979 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC105137.1-201ENST00000484355 562 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 RFPL4AP5-201ENST00000514977 504 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 RNU6-311P-201ENST00000516224 102 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AP001372.4-201ENST00000524889 472 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 OR4A2P-201ENST00000527276 913 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AP000827.1-201ENST00000527814 258 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AP001160.4-201ENST00000596971 382 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC245389.1-201ENST00000605141 529 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AP004247.3-201ENST00000608682 624 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC009237.15-201ENST00000610252 501 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AL592148.2-201ENST00000612210 372 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AL138478.1-201ENST00000612252 832 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC090897.3-201ENST00000636973 1157 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC125257.1-201ENST00000560400 2930 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC005261.4-201ENST00000600047 1385 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 CASC19-206ENST00000641028 1430 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 RN7SKP224-201ENST00000364140 325 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 RN7SKP280-201ENST00000364196 304 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 RNU6-906P-201ENST00000384700 70 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AL136310.1-201ENST00000404926 654 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 RPL23AP26-201ENST00000412728 464 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 TMSB10P2-201ENST00000416049 131 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 HIGD1AP12-201ENST00000427832 281 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 PHBP16-201ENST00000446318 950 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 BTF3P6-201ENST00000448054 499 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 MRPL42P4-201ENST00000453267 443 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 PTGES3P5-201ENST00000455109 434 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 SNORD11.1-201ENST00000459482 85 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AC096992.1-201ENST00000459808 709 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 HMGB3P16-201ENST00000508037 287 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 HIGD1AP6-201ENST00000521833 279 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AP003730.1-201ENST00000524605 285 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 MIR5708-201ENST00000579723 85 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 MIR4666A-201ENST00000580160 79 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AC015914.2-201ENST00000618167 288 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms