Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RNU6-583P-201ENST00000516012 92 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RNA5SP135-201ENST00000517019 125 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC130365.2-201ENST00000525882 1201 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 PTP4A1P6-201ENST00000531034 478 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC002310.3-201ENST00000569728 723 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AL136097.3-201ENST00000611097 505 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AL133173.2-201ENST00000614270 90 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC096861.1-201ENST00000616652 240 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC006600.2-201ENST00000624834 2506 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 IMMTP1-201ENST00000435590 2219 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 RNU6-582P-201ENST00000362989 107 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 RNU6-216P-201ENST00000363282 104 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 SNORD1C-201ENST00000363315 78 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 RNU6-777P-201ENST00000364265 104 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 GNG5P2-201ENST00000372054 207 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 RNU6-456P-201ENST00000384493 107 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 NIPA2P1-201ENST00000426223 976 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AC023347.2-201ENST00000433994 462 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 PNKDP1-201ENST00000435914 430 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 RPS10P18-201ENST00000442662 495 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 HMGN2P26-201ENST00000463169 339 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AC079080.1-201ENST00000479841 822 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AP002453.1-201ENST00000492327 668 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 HMGB1P30-201ENST00000492455 606 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 RNU6-150P-201ENST00000516237 95 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 SNORA48.10-201ENST00000516965 160 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AC068305.2-201ENST00000550567 1205 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AL359999.1-201ENST00000604513 294 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 MIR6861-201ENST00000618657 64 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AP001052.1-201ENST00000626421 99 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 ELL2P4-201ENST00000446870 1376 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 AL354854.1-201ENST00000455940 1363 ntBASIC5.49□□□□□ -1.53
ATG4DQ86TL0 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG4DQ86TL0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AC027575.3-201ENST00000583058 2747 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms