Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC007394.1-201ENST00000421941 531 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 EIF4EP1-201ENST00000422311 642 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC099336.2-201ENST00000422457 254 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 PRPF38AP2-201ENST00000438179 851 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 HMGB3P9-201ENST00000441799 583 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC099560.2-201ENST00000457554 255 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 RPL7P18-201ENST00000478965 734 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC126121.1-201ENST00000482313 553 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC010587.2-201ENST00000511727 448 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHFQ7M4L6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 GSTP1P1-201ENST00000548078 319 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 ELOCP32-201ENST00000548625 324 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC090888.1-201ENST00000561335 1141 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC079171.1-201ENST00000568788 914 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC002400.1-201ENST00000569310 726 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC069304.3-201ENST00000603938 1084 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC096553.1-201ENST00000605169 829 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AL121932.1-201ENST00000605542 214 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC073348.1-201ENST00000623002 331 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHFQ7M4L6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHFQ7M4L6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHFQ7M4L6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHFQ7M4L6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
SHFQ7M4L6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHFQ7M4L6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHFQ7M4L6 ZNF542P-204ENST00000482727 1305 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHFQ7M4L6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHFQ7M4L6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 OR10J6P-201ENST00000289731 930 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 RNU5D-1-201ENST00000363299 116 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 RNA5SP428-201ENST00000365129 132 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHFQ7M4L6 SNORA70-201ENST00000384436 135 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 SKINT1L-201ENST00000401057 817 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AL133264.1-201ENST00000407157 562 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 RNU2-42P-201ENST00000410697 113 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC004074.1-201ENST00000421810 1063 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 RPL7P57-201ENST00000423238 740 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 CHEK2P5-201ENST00000423877 246 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 AL391987.1-201ENST00000441025 200 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC104651.2-201ENST00000447549 528 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AL109741.2-201ENST00000455561 343 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 RNU7-125P-201ENST00000458760 62 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 COPS8P2-201ENST00000473228 627 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 RPS18P6-201ENST00000476880 458 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC109445.1-201ENST00000512356 383 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC105185.1-201ENST00000518705 535 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 IGKV3D-34-201ENST00000522638 302 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC007225.2-201ENST00000562529 256 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AL390838.2-201ENST00000602394 274 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC123786.2-201ENST00000603459 275 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC106791.2-201ENST00000604680 391 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC091979.2-201ENST00000607514 214 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AP001521.2-201ENST00000608772 546 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC100847.1-201ENST00000611316 481 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 CR381572.2-201ENST00000624852 397 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms