Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 AC112503.1-201ENST00000608436 391 ntBASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 AC124016.2-201ENST00000610058 665 ntBASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 MIR6075-201ENST00000620782 95 ntBASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 AL445363.3-201ENST00000623080 671 ntBASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 AC010608.2-201ENST00000624830 470 ntBASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 RLIMP1-201ENST00000339626 1680 ntBASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 AL118496.1-201ENST00000440201 1812 ntBASIC4.28□□□□□ -1.72
LYSMD4Q5XG99 AC073136.1-201ENST00000449426 2884 ntBASIC4.28□□□□□ -1.73
LYSMD4Q5XG99 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC100778.3-201ENST00000580060 1750 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 USP9YP4-201ENST00000424401 1745 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC027290.2-201ENST00000623210 18662 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 RNU5B-4P-201ENST00000363508 111 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 U6.112-201ENST00000384129 70 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 ENSAP1-201ENST00000392855 326 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 DNAJC19P6-201ENST00000401853 280 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 OR6C64P-201ENST00000419708 825 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 FABP5P3-201ENST00000437960 408 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 BTF3P6-201ENST00000448054 499 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC008280.2-201ENST00000455473 307 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 RPL37P3-201ENST00000456825 293 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 RPL35AP15-201ENST00000468042 339 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 HMGB1P38-201ENST00000490557 577 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 PRELID3BP6-201ENST00000503839 571 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC069306.1-201ENST00000507006 843 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 PGBD4P4-201ENST00000509673 613 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 RNU6-513P-201ENST00000516104 104 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 SCARNA1-201ENST00000517138 166 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 CYB5AP5-201ENST00000549779 389 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC095057.3-201ENST00000567102 1157 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AP000919.1-202ENST00000581139 1264 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC091057.3-201ENST00000602684 733 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AP002906.1-201ENST00000603405 233 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AL354984.3-201ENST00000604803 325 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AL451086.1-201ENST00000605596 223 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC008966.2-201ENST00000606157 453 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AL512427.1-201ENST00000618593 349 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC084824.4-201ENST00000620106 731 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AP003072.4-201ENST00000624580 310 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC126544.2-201ENST00000625174 749 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 DHX9P1-201ENST00000436565 3076 ntBASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LYSMD4Q5XG99 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 DDX18P3-201ENST00000404856 2007 ntBASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 AC011755.1-201ENST00000623763 2049 ntBASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LYSMD4Q5XG99 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms