Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.67□□□□□ -1.82
RFX4Q33E94 AC025181.1-201ENST00000477507 416 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.67□□□□□ -1.82
RFX4Q33E94 NIPA2P2-201ENST00000496376 1083 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.67□□□□□ -1.82
RFX4Q33E94 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.67□□□□□ -1.82
RFX4Q33E94 RN7SKP83-201ENST00000516512 178 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 RN7SKP209-201ENST00000516888 304 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 HMGB1P46-201ENST00000520062 610 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.67□□□□□ -1.82
RFX4Q33E94 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.67□□□□□ -1.82
RFX4Q33E94 AL161713.1-201ENST00000555538 145 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 AL731537.2-201ENST00000561565 951 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.67□□□□□ -1.82
RFX4Q33E94 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.67□□□□□ -1.82
RFX4Q33E94 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.67□□□□□ -1.82
RFX4Q33E94 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.67□□□□□ -1.82
RFX4Q33E94 BRDTP1-201ENST00000605735 677 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 AC012557.1-201ENST00000607115 611 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.67□□□□□ -1.82
RFX4Q33E94 AC091905.1-201ENST00000624400 311 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 AC119674.1-212ENST00000641155 993 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RFX4Q33E94 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RFX4Q33E94 AC139713.2-214ENST00000642059 1811 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.67□□□□□ -1.82
RFX4Q33E94 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
RFX4Q33E94 OTUD4P1-201ENST00000237841 3067 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RFX4Q33E94 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFX4Q33E94 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
RFX4Q33E94 AL118496.1-201ENST00000440201 1812 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFX4Q33E94 TNPO1P3-201ENST00000436471 2662 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFX4Q33E94 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
RFX4Q33E94 IGKV7-3-201ENST00000357453 298 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
RFX4Q33E94 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.66□□□□□ -1.82
RFX4Q33E94 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RFX4Q33E94 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.66□□□□□ -1.82
RFX4Q33E94 MIR320B1-201ENST00000390209 79 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 HMGB3P19-201ENST00000403971 560 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.66□□□□□ -1.82
RFX4Q33E94 RPL23AP26-201ENST00000412728 464 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 TRGV6-201ENST00000417928 299 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 RPL30P3-201ENST00000424262 333 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 AC009965.2-201ENST00000425328 970 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 MTND4LP14-201ENST00000429447 288 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 MTND4LP7-201ENST00000431728 294 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 MTND2P21-201ENST00000436242 1042 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 AC083863.1-201ENST00000438811 231 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.66□□□□□ -1.82
RFX4Q33E94 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.66□□□□□ -1.82
RFX4Q33E94 RPS29P33-201ENST00000456717 146 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 SUMO1P1-201ENST00000497904 306 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 AC008802.1-201ENST00000519121 791 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.66□□□□□ -1.82
RFX4Q33E94 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.66□□□□□ -1.82
RFX4Q33E94 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.66□□□□□ -1.82
RFX4Q33E94 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.66□□□□□ -1.82
RFX4Q33E94 NOP56P3-201ENST00000549457 385 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.66□□□□□ -1.82
RFX4Q33E94 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.66□□□□□ -1.82
RFX4Q33E94 PSMB7P1-201ENST00000556349 514 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.66□□□□□ -1.82
RFX4Q33E94 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.66□□□□□ -1.82
RFX4Q33E94 AC006946.3-201ENST00000609791 756 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RFX4Q33E94 AL359715.4-201ENST00000606629 1436 ntBASIC3.66□□□□□ -1.82
RFX4Q33E94 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFX4Q33E94 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
RFX4Q33E94 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFX4Q33E94 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFX4Q33E94 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.65□□□□□ -1.82
RFX4Q33E94 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.65□□□□□ -1.82
RFX4Q33E94 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFX4Q33E94 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFX4Q33E94 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RFX4Q33E94 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
RFX4Q33E94 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFX4Q33E94 RNU6-883P-201ENST00000384597 107 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 MIR585-201ENST00000384887 94 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.65□□□□□ -1.83
RFX4Q33E94 AC245028.1-201ENST00000423259 256 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 HIGD1AP4-201ENST00000430194 280 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 AC068287.1-201ENST00000430283 295 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 CBX1P1-201ENST00000440184 427 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 HMGB1P5-202ENST00000451497 985 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 RN7SL481P-201ENST00000477764 299 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 AC025674.1-201ENST00000507074 324 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.65□□□□□ -1.83
RFX4Q33E94 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.65□□□□□ -1.83
RFX4Q33E94 SUMO2P20-201ENST00000520803 283 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.65□□□□□ -1.83
RFX4Q33E94 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.65□□□□□ -1.83
RFX4Q33E94 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.65□□□□□ -1.83
RFX4Q33E94 SNRPGP1-201ENST00000553864 222 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms