Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AL592436.1-201ENST00000605135 558 ntBASIC2.89□□□□□ -1.95
CCL20P78556 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC2.89□□□□□ -1.95
CCL20P78556 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.89□□□□□ -1.95
CCL20P78556 AC133644.2-201ENST00000608142 540 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC116651.1-201ENST00000609724 556 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC023043.4-201ENST00000612081 449 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC068870.2-201ENST00000620635 389 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC004943.3-201ENST00000624116 600 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC011944.2-201ENST00000624440 683 ntBASIC2.89□□□□□ -1.95
CCL20P78556 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCL20P78556 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CCL20P78556 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.89□□□□□ -1.95
CCL20P78556 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CCL20P78556 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.89□□□□□ -1.95
CCL20P78556 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCL20P78556 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CCL20P78556 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CCL20P78556 RNF6P1-201ENST00000444889 1784 ntBASIC2.88□□□□□ -1.95
CCL20P78556 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCL20P78556 RNU6-805P-201ENST00000365643 106 ntBASIC2.88□□□□□ -1.95
CCL20P78556 U1.1-201ENST00000384101 164 ntBASIC2.88□□□□□ -1.95
CCL20P78556 MIR129-1-201ENST00000384972 72 ntBASIC2.88□□□□□ -1.95
CCL20P78556 RNU4-34P-201ENST00000410431 124 ntBASIC2.88□□□□□ -1.95
CCL20P78556 RNA5SP107-201ENST00000411358 122 ntBASIC2.88□□□□□ -1.95
CCL20P78556 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCL20P78556 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC2.88□□□□□ -1.95
CCL20P78556 RPL23AP1-201ENST00000428990 471 ntBASIC2.88□□□□□ -1.95
CCL20P78556 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.88□□□□□ -1.95
CCL20P78556 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.88□□□□□ -1.95
CCL20P78556 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.88□□□□□ -1.95
CCL20P78556 AC099563.1-201ENST00000456086 418 ntBASIC2.88□□□□□ -1.95
CCL20P78556 RPS27P29-201ENST00000463110 252 ntBASIC2.88□□□□□ -1.95
CCL20P78556 AP000873.1-201ENST00000463987 400 ntBASIC2.88□□□□□ -1.95
CCL20P78556 RPS23P7-201ENST00000466210 444 ntBASIC2.88□□□□□ -1.95
CCL20P78556 AC041039.1-201ENST00000485656 536 ntBASIC2.88□□□□□ -1.95
CCL20P78556 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC2.88□□□□□ -1.95
CCL20P78556 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.88□□□□□ -1.95
CCL20P78556 TXNP6-201ENST00000510190 310 ntBASIC2.88□□□□□ -1.95
CCL20P78556 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.88□□□□□ -1.95
CCL20P78556 PHBP14-201ENST00000512887 367 ntBASIC2.88□□□□□ -1.95
CCL20P78556 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.88□□□□□ -1.95
CCL20P78556 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC2.88□□□□□ -1.95
CCL20P78556 SEC11B-201ENST00000518383 499 ntBASIC2.88□□□□□ -1.95
CCL20P78556 IGKV2-23-201ENST00000518729 323 ntBASIC2.88□□□□□ -1.95
CCL20P78556 NDUFA5P2-201ENST00000519723 344 ntBASIC2.88□□□□□ -1.95
CCL20P78556 HIGD1AP18-201ENST00000520730 278 ntBASIC2.88□□□□□ -1.95
CCL20P78556 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.88□□□□□ -1.95
CCL20P78556 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC2.88□□□□□ -1.95
CCL20P78556 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CCL20P78556 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.88□□□□□ -1.95
CCL20P78556 TRAV15-201ENST00000556680 249 ntBASIC2.88□□□□□ -1.95
CCL20P78556 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC2.88□□□□□ -1.95
CCL20P78556 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC2.88□□□□□ -1.95
CCL20P78556 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC2.88□□□□□ -1.95
CCL20P78556 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC2.88□□□□□ -1.95
CCL20P78556 AC022149.2-201ENST00000621061 203 ntBASIC2.88□□□□□ -1.95
CCL20P78556 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCL20P78556 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCL20P78556 ZNF542P-204ENST00000482727 1305 ntBASIC2.88□□□□□ -1.95
CCL20P78556 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCL20P78556 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCL20P78556 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCL20P78556 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.87□□□□□ -1.95
CCL20P78556 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCL20P78556 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCL20P78556 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCL20P78556 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCL20P78556 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCL20P78556 MIR148B-201ENST00000362252 99 ntBASIC2.87□□□□□ -1.95
CCL20P78556 SNORA73.2-201ENST00000364946 201 ntBASIC2.87□□□□□ -1.95
CCL20P78556 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
CCL20P78556 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.87□□□□□ -1.95
CCL20P78556 RNA5SP424-201ENST00000390988 115 ntBASIC2.87□□□□□ -1.95
CCL20P78556 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCL20P78556 MTND4P22-201ENST00000413116 1169 ntBASIC2.87□□□□□ -1.95
CCL20P78556 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC2.87□□□□□ -1.95
CCL20P78556 AL049610.1-201ENST00000423374 372 ntBASIC2.87□□□□□ -1.95
CCL20P78556 ARF4P2-201ENST00000430209 526 ntBASIC2.87□□□□□ -1.95
CCL20P78556 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.87□□□□□ -1.95
CCL20P78556 PTMAP6-201ENST00000439110 327 ntBASIC2.87□□□□□ -1.95
CCL20P78556 AL645931.1-201ENST00000439737 410 ntBASIC2.87□□□□□ -1.95
CCL20P78556 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.87□□□□□ -1.95
CCL20P78556 AC144530.1-201ENST00000452862 555 ntBASIC2.87□□□□□ -1.95
CCL20P78556 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.87□□□□□ -1.95
CCL20P78556 RPL9P32-201ENST00000464118 620 ntBASIC2.87□□□□□ -1.95
CCL20P78556 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC2.87□□□□□ -1.95
CCL20P78556 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.87□□□□□ -1.95
CCL20P78556 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
CCL20P78556 AC114967.1-201ENST00000504890 259 ntBASIC2.87□□□□□ -1.95
CCL20P78556 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.87□□□□□ -1.95
CCL20P78556 AC022695.1-201ENST00000522089 237 ntBASIC2.87□□□□□ -1.95
CCL20P78556 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCL20P78556 AP001922.4-201ENST00000526967 290 ntBASIC2.87□□□□□ -1.95
CCL20P78556 OR4C2P-201ENST00000530855 1064 ntBASIC2.87□□□□□ -1.95
CCL20P78556 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCL20P78556 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.87□□□□□ -1.95
CCL20P78556 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.87□□□□□ -1.95
CCL20P78556 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.87□□□□□ -1.95
CCL20P78556 MIR4270-201ENST00000581799 70 ntBASIC2.87□□□□□ -1.95
CCL20P78556 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms