Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.12□□□□□ -1.91
LSM3P62310 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.12□□□□□ -1.91
LSM3P62310 MIR4480-201ENST00000582492 71 ntBASIC3.12□□□□□ -1.91
LSM3P62310 AC010680.3-201ENST00000604215 520 ntBASIC3.12□□□□□ -1.91
LSM3P62310 AC010200.2-201ENST00000605098 235 ntBASIC3.12□□□□□ -1.91
LSM3P62310 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LSM3P62310 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.12□□□□□ -1.91
LSM3P62310 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LSM3P62310 AL356274.2-201ENST00000624379 3752 ntBASIC3.11□□□□□ -1.91
LSM3P62310 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LSM3P62310 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM3P62310 AC114546.3-201ENST00000623582 1734 ntBASIC3.11□□□□□ -1.91
LSM3P62310 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LSM3P62310 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LSM3P62310 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.11□□□□□ -1.91
LSM3P62310 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.11□□□□□ -1.91
LSM3P62310 AC069218.2-201ENST00000411665 344 ntBASIC3.11□□□□□ -1.91
LSM3P62310 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM3P62310 AC006960.1-201ENST00000419980 153 ntBASIC3.11□□□□□ -1.91
LSM3P62310 AL732292.1-201ENST00000426692 226 ntBASIC3.11□□□□□ -1.91
LSM3P62310 AL390879.2-203ENST00000426943 1121 ntBASIC3.11□□□□□ -1.91
LSM3P62310 B3GNT2P1-201ENST00000434960 952 ntBASIC3.11□□□□□ -1.91
LSM3P62310 HMGB3P11-201ENST00000440127 604 ntBASIC3.11□□□□□ -1.91
LSM3P62310 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM3P62310 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM3P62310 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM3P62310 SETP14-201ENST00000497538 873 ntBASIC3.11□□□□□ -1.91
LSM3P62310 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM3P62310 IGKV2D-19-201ENST00000523346 262 ntBASIC3.11□□□□□ -1.91
LSM3P62310 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LSM3P62310 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM3P62310 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.11□□□□□ -1.91
LSM3P62310 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM3P62310 FAM106CP-201ENST00000582212 507 ntBASIC3.11□□□□□ -1.91
LSM3P62310 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LSM3P62310 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM3P62310 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.11□□□□□ -1.91
LSM3P62310 AC123786.2-201ENST00000603459 275 ntBASIC3.11□□□□□ -1.91
LSM3P62310 AL049539.1-201ENST00000611964 459 ntBASIC3.11□□□□□ -1.91
LSM3P62310 AC023043.4-201ENST00000612081 449 ntBASIC3.11□□□□□ -1.91
LSM3P62310 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.11□□□□□ -1.91
LSM3P62310 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.11□□□□□ -1.91
LSM3P62310 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.11□□□□□ -1.91
LSM3P62310 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.11□□□□□ -1.91
LSM3P62310 CUL4AP1-201ENST00000514750 1863 ntBASIC3.11□□□□□ -1.91
LSM3P62310 FAM91A3P-201ENST00000456826 2544 ntBASIC3.11□□□□□ -1.91
LSM3P62310 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LSM3P62310 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
LSM3P62310 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LSM3P62310 SNORD6-201ENST00000365444 73 ntBASIC3.1□□□□□ -1.91
LSM3P62310 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
LSM3P62310 AL583834.1-201ENST00000406943 343 ntBASIC3.1□□□□□ -1.91
LSM3P62310 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LSM3P62310 RNU6-603P-201ENST00000411403 107 ntBASIC3.1□□□□□ -1.91
LSM3P62310 AC007899.1-201ENST00000412776 775 ntBASIC3.1□□□□□ -1.91
LSM3P62310 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM3P62310 VN1R31P-201ENST00000417498 730 ntBASIC3.1□□□□□ -1.91
LSM3P62310 RPL12P34-201ENST00000424532 479 ntBASIC3.1□□□□□ -1.91
LSM3P62310 AL590762.4-201ENST00000425885 253 ntBASIC3.1□□□□□ -1.91
LSM3P62310 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.1□□□□□ -1.91
LSM3P62310 USP9YP31-201ENST00000431405 881 ntBASIC3.1□□□□□ -1.91
LSM3P62310 USP9YP7-201ENST00000436723 430 ntBASIC3.1□□□□□ -1.91
LSM3P62310 AC009969.1-201ENST00000438726 172 ntBASIC3.1□□□□□ -1.91
LSM3P62310 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM3P62310 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.1□□□□□ -1.91
LSM3P62310 TXNP2-201ENST00000443918 295 ntBASIC3.1□□□□□ -1.91
LSM3P62310 USP9YP32-201ENST00000452432 430 ntBASIC3.1□□□□□ -1.91
LSM3P62310 RPL5P32-201ENST00000454085 879 ntBASIC3.1□□□□□ -1.91
LSM3P62310 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.1□□□□□ -1.91
LSM3P62310 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LSM3P62310 RNU6-347P-201ENST00000516658 105 ntBASIC3.1□□□□□ -1.91
LSM3P62310 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.1□□□□□ -1.91
LSM3P62310 MED28P5-201ENST00000528254 438 ntBASIC3.1□□□□□ -1.91
LSM3P62310 UBE2NP1-201ENST00000545592 458 ntBASIC3.1□□□□□ -1.91
LSM3P62310 AC120057.2-201ENST00000571520 271 ntBASIC3.1□□□□□ -1.91
LSM3P62310 HNRNPCP4-201ENST00000571636 900 ntBASIC3.1□□□□□ -1.91
LSM3P62310 ARF4P1-201ENST00000605447 541 ntBASIC3.1□□□□□ -1.91
LSM3P62310 AL591034.3-201ENST00000605511 685 ntBASIC3.1□□□□□ -1.91
LSM3P62310 AC107294.3-201ENST00000609211 526 ntBASIC3.1□□□□□ -1.91
LSM3P62310 OR6R2P-201ENST00000609216 300 ntBASIC3.1□□□□□ -1.91
LSM3P62310 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.1□□□□□ -1.91
LSM3P62310 AL121890.3-201ENST00000618494 516 ntBASIC3.1□□□□□ -1.91
LSM3P62310 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.1□□□□□ -1.91
LSM3P62310 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.1□□□□□ -1.91
LSM3P62310 RLIMP1-201ENST00000339626 1680 ntBASIC3.1□□□□□ -1.91
LSM3P62310 AL451142.2-201ENST00000429076 2090 ntBASIC3.1□□□□□ -1.91
LSM3P62310 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
LSM3P62310 AC024560.2-201ENST00000507981 1497 ntBASIC3.09□□□□□ -1.91
LSM3P62310 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM3P62310 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LSM3P62310 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LSM3P62310 AC009313.2-201ENST00000417893 1941 ntBASIC3.09□□□□□ -1.91
LSM3P62310 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
LSM3P62310 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.91
LSM3P62310 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LSM3P62310 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LSM3P62310 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LSM3P62310 ZNF602P-201ENST00000405929 924 ntBASIC3.09□□□□□ -1.91
LSM3P62310 OR8G2P-201ENST00000412796 908 ntBASIC3.09□□□□□ -1.91
LSM3P62310 AC119751.6-201ENST00000416712 186 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms