Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 MIR6798-201ENST00000612887 67 ntBASIC3.44□□□□□ -1.86
ACTBP60709 AL445363.3-201ENST00000623080 671 ntBASIC3.44□□□□□ -1.86
ACTBP60709 FAM91A3P-201ENST00000456826 2544 ntBASIC3.44□□□□□ -1.86
ACTBP60709 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
ACTBP60709 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ACTBP60709 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ACTBP60709 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ACTBP60709 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ACTBP60709 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ACTBP60709 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ACTBP60709 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.44□□□□□ -1.86
ACTBP60709 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
ACTBP60709 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 SNORA60-201ENST00000362396 134 ntBASIC3.43□□□□□ -1.86
ACTBP60709 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.43□□□□□ -1.86
ACTBP60709 AL583835.1-201ENST00000399570 407 ntBASIC3.43□□□□□ -1.86
ACTBP60709 HLFP1-201ENST00000402375 499 ntBASIC3.43□□□□□ -1.86
ACTBP60709 RNA5SP36-201ENST00000410197 133 ntBASIC3.43□□□□□ -1.86
ACTBP60709 RN7SKP235-201ENST00000410662 305 ntBASIC3.43□□□□□ -1.86
ACTBP60709 AC011933.1-201ENST00000413334 321 ntBASIC3.43□□□□□ -1.86
ACTBP60709 RPS3AP54-201ENST00000435535 734 ntBASIC3.43□□□□□ -1.86
ACTBP60709 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 AL157884.3-201ENST00000448273 1184 ntBASIC3.43□□□□□ -1.86
ACTBP60709 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.43□□□□□ -1.86
ACTBP60709 AC116533.1-201ENST00000459748 321 ntBASIC3.43□□□□□ -1.86
ACTBP60709 AC146507.1-201ENST00000468335 354 ntBASIC3.43□□□□□ -1.86
ACTBP60709 AC011276.1-201ENST00000469688 323 ntBASIC3.43□□□□□ -1.86
ACTBP60709 AC109327.1-201ENST00000471666 403 ntBASIC3.43□□□□□ -1.86
ACTBP60709 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.43□□□□□ -1.86
ACTBP60709 FTH1P24-201ENST00000503502 462 ntBASIC3.43□□□□□ -1.86
ACTBP60709 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.43□□□□□ -1.86
ACTBP60709 AC021146.1-201ENST00000511202 716 ntBASIC3.43□□□□□ -1.86
ACTBP60709 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.43□□□□□ -1.86
ACTBP60709 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.43□□□□□ -1.86
ACTBP60709 OR5D17P-201ENST00000531492 978 ntBASIC3.43□□□□□ -1.86
ACTBP60709 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.43□□□□□ -1.86
ACTBP60709 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.43□□□□□ -1.86
ACTBP60709 CENPUP2-201ENST00000555897 1186 ntBASIC3.43□□□□□ -1.86
ACTBP60709 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.43□□□□□ -1.86
ACTBP60709 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.43□□□□□ -1.86
ACTBP60709 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.43□□□□□ -1.86
ACTBP60709 AF230666.2-201ENST00000602328 725 ntBASIC3.43□□□□□ -1.86
ACTBP60709 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.43□□□□□ -1.86
ACTBP60709 AC092653.1-201ENST00000608509 531 ntBASIC3.43□□□□□ -1.86
ACTBP60709 AC239803.2-201ENST00000610161 430 ntBASIC3.43□□□□□ -1.86
ACTBP60709 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 MIR8058-201ENST00000615737 89 ntBASIC3.43□□□□□ -1.86
ACTBP60709 AC124312.6-202ENST00000623624 418 ntBASIC3.43□□□□□ -1.86
ACTBP60709 RPL23AP61-201ENST00000623642 466 ntBASIC3.43□□□□□ -1.86
ACTBP60709 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.43□□□□□ -1.86
ACTBP60709 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.43□□□□□ -1.86
ACTBP60709 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.43□□□□□ -1.86
ACTBP60709 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.43□□□□□ -1.86
ACTBP60709 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
ACTBP60709 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ACTBP60709 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.42□□□□□ -1.86
ACTBP60709 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ACTBP60709 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.42□□□□□ -1.86
ACTBP60709 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ACTBP60709 AL158163.1-201ENST00000603915 1649 ntBASIC3.42□□□□□ -1.86
ACTBP60709 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
ACTBP60709 RNA5SP509-201ENST00000364577 119 ntBASIC3.42□□□□□ -1.86
ACTBP60709 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ACTBP60709 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.42□□□□□ -1.86
ACTBP60709 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.42□□□□□ -1.86
ACTBP60709 MTND2P15-201ENST00000418575 892 ntBASIC3.42□□□□□ -1.86
ACTBP60709 MFSD13B-201ENST00000420133 1290 ntBASIC3.42□□□□□ -1.86
ACTBP60709 CHIAP3-201ENST00000423668 1133 ntBASIC3.42□□□□□ -1.86
ACTBP60709 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.42□□□□□ -1.86
ACTBP60709 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.42□□□□□ -1.86
ACTBP60709 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.42□□□□□ -1.86
ACTBP60709 MTCYBP31-201ENST00000438855 1122 ntBASIC3.42□□□□□ -1.86
ACTBP60709 CBX1P1-201ENST00000440184 427 ntBASIC3.42□□□□□ -1.86
ACTBP60709 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.42□□□□□ -1.86
ACTBP60709 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.42□□□□□ -1.86
ACTBP60709 CYCSP42-201ENST00000450823 238 ntBASIC3.42□□□□□ -1.86
ACTBP60709 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.42□□□□□ -1.86
ACTBP60709 RPL7P1-201ENST00000468161 747 ntBASIC3.42□□□□□ -1.86
ACTBP60709 RPL7P9-201ENST00000468715 747 ntBASIC3.42□□□□□ -1.86
ACTBP60709 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.42□□□□□ -1.86
ACTBP60709 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.42□□□□□ -1.86
ACTBP60709 RPL35P6-201ENST00000490024 372 ntBASIC3.42□□□□□ -1.86
ACTBP60709 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.42□□□□□ -1.86
ACTBP60709 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.42□□□□□ -1.86
ACTBP60709 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.42□□□□□ -1.86
ACTBP60709 AC092593.2-201ENST00000513866 913 ntBASIC3.42□□□□□ -1.86
ACTBP60709 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.42□□□□□ -1.86
ACTBP60709 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ACTBP60709 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms