Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.34□□□□□ -1.71
PEX3P56589 AL139089.1-201ENST00000620372 975 ntBASIC4.34□□□□□ -1.71
PEX3P56589 AL356121.2-201ENST00000624715 780 ntBASIC4.34□□□□□ -1.71
PEX3P56589 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PEX3P56589 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PEX3P56589 AC074029.4-201ENST00000624796 1859 ntBASIC4.34□□□□□ -1.71
PEX3P56589 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.34□□□□□ -1.72
PEX3P56589 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.34□□□□□ -1.72
PEX3P56589 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.34□□□□□ -1.72
PEX3P56589 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PEX3P56589 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PEX3P56589 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PEX3P56589 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PEX3P56589 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PEX3P56589 PTGES3P2-201ENST00000407942 482 ntBASIC4.33□□□□□ -1.72
PEX3P56589 RNA5SP104-201ENST00000410989 118 ntBASIC4.33□□□□□ -1.72
PEX3P56589 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.33□□□□□ -1.72
PEX3P56589 OR51A6P-201ENST00000418680 1004 ntBASIC4.33□□□□□ -1.72
PEX3P56589 AC012497.1-201ENST00000429392 575 ntBASIC4.33□□□□□ -1.72
PEX3P56589 HMGB1P37-201ENST00000439613 609 ntBASIC4.33□□□□□ -1.72
PEX3P56589 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.33□□□□□ -1.72
PEX3P56589 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.33□□□□□ -1.72
PEX3P56589 AC078857.1-201ENST00000469870 667 ntBASIC4.33□□□□□ -1.72
PEX3P56589 NPM1P17-201ENST00000479221 602 ntBASIC4.33□□□□□ -1.72
PEX3P56589 AC025445.1-201ENST00000502728 300 ntBASIC4.33□□□□□ -1.72
PEX3P56589 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.33□□□□□ -1.72
PEX3P56589 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.33□□□□□ -1.72
PEX3P56589 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.33□□□□□ -1.72
PEX3P56589 OR8X1P-201ENST00000534542 869 ntBASIC4.33□□□□□ -1.72
PEX3P56589 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.33□□□□□ -1.72
PEX3P56589 AC122134.1-201ENST00000565664 1104 ntBASIC4.33□□□□□ -1.72
PEX3P56589 AC005255.1-201ENST00000593748 216 ntBASIC4.33□□□□□ -1.72
PEX3P56589 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.33□□□□□ -1.72
PEX3P56589 AC015726.1-201ENST00000602353 681 ntBASIC4.33□□□□□ -1.72
PEX3P56589 AC084373.1-201ENST00000603311 235 ntBASIC4.33□□□□□ -1.72
PEX3P56589 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.33□□□□□ -1.72
PEX3P56589 AC078899.5-201ENST00000612475 178 ntBASIC4.33□□□□□ -1.72
PEX3P56589 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.33□□□□□ -1.72
PEX3P56589 AC245389.2-201ENST00000616023 576 ntBASIC4.33□□□□□ -1.72
PEX3P56589 AC242843.1-201ENST00000618702 573 ntBASIC4.33□□□□□ -1.72
PEX3P56589 AC073530.2-201ENST00000623987 261 ntBASIC4.33□□□□□ -1.72
PEX3P56589 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.33□□□□□ -1.72
PEX3P56589 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PEX3P56589 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PEX3P56589 ASNSP1-201ENST00000518311 1939 ntBASIC4.33□□□□□ -1.72
PEX3P56589 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
PEX3P56589 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PEX3P56589 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PEX3P56589 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PEX3P56589 RNU6-252P-201ENST00000363232 107 ntBASIC4.32□□□□□ -1.72
PEX3P56589 SNORD74.4-201ENST00000364129 80 ntBASIC4.32□□□□□ -1.72
PEX3P56589 AL450992.3-201ENST00000413192 568 ntBASIC4.32□□□□□ -1.72
PEX3P56589 RPL7P2-201ENST00000427639 268 ntBASIC4.32□□□□□ -1.72
PEX3P56589 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.32□□□□□ -1.72
PEX3P56589 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.32□□□□□ -1.72
PEX3P56589 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.32□□□□□ -1.72
PEX3P56589 AC104306.1-201ENST00000449702 371 ntBASIC4.32□□□□□ -1.72
PEX3P56589 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.32□□□□□ -1.72
PEX3P56589 OR9M1P-201ENST00000459641 921 ntBASIC4.32□□□□□ -1.72
PEX3P56589 AC015908.1-201ENST00000478739 476 ntBASIC4.32□□□□□ -1.72
PEX3P56589 CDH12P2-201ENST00000504393 298 ntBASIC4.32□□□□□ -1.72
PEX3P56589 AC004923.2-201ENST00000529649 369 ntBASIC4.32□□□□□ -1.72
PEX3P56589 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.32□□□□□ -1.72
PEX3P56589 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.32□□□□□ -1.72
PEX3P56589 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.32□□□□□ -1.72
PEX3P56589 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.32□□□□□ -1.72
PEX3P56589 AC068790.5-201ENST00000602741 355 ntBASIC4.32□□□□□ -1.72
PEX3P56589 MIR1264-201ENST00000616374 69 ntBASIC4.32□□□□□ -1.72
PEX3P56589 FRG1DP-201ENST00000635586 771 ntBASIC4.32□□□□□ -1.72
PEX3P56589 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PEX3P56589 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PEX3P56589 ZNF90P1-201ENST00000480493 1951 ntBASIC4.32□□□□□ -1.72
PEX3P56589 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.32□□□□□ -1.72
PEX3P56589 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PEX3P56589 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PEX3P56589 AC097504.1-201ENST00000515103 2415 ntBASIC4.31□□□□□ -1.72
PEX3P56589 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PEX3P56589 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.31□□□□□ -1.72
PEX3P56589 RNA5SP97-201ENST00000365006 84 ntBASIC4.31□□□□□ -1.72
PEX3P56589 RNU6-609P-201ENST00000365459 107 ntBASIC4.31□□□□□ -1.72
PEX3P56589 RNA5SP306-201ENST00000411087 107 ntBASIC4.31□□□□□ -1.72
PEX3P56589 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 UBE2V1P6-201ENST00000430840 422 ntBASIC4.31□□□□□ -1.72
PEX3P56589 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.31□□□□□ -1.72
PEX3P56589 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 TPTE2P3-201ENST00000441562 1189 ntBASIC4.31□□□□□ -1.72
PEX3P56589 AC023512.1-201ENST00000444513 499 ntBASIC4.31□□□□□ -1.72
PEX3P56589 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.31□□□□□ -1.72
PEX3P56589 RPL21P11-201ENST00000461458 483 ntBASIC4.31□□□□□ -1.72
PEX3P56589 RPL7P24-201ENST00000493052 752 ntBASIC4.31□□□□□ -1.72
PEX3P56589 PRELID3BP7-201ENST00000503606 469 ntBASIC4.31□□□□□ -1.72
PEX3P56589 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.31□□□□□ -1.72
PEX3P56589 AC108120.2-201ENST00000512973 294 ntBASIC4.31□□□□□ -1.72
PEX3P56589 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.31□□□□□ -1.72
PEX3P56589 RNU6-1308P-201ENST00000516817 103 ntBASIC4.31□□□□□ -1.72
PEX3P56589 VTA1P2-201ENST00000520205 911 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms