Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC005532.2-201ENST00000467154 373 ntBASIC4.4□□□□□ -1.71
CDH12P55289 RPL7AP10-201ENST00000481016 791 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AC140172.1-201ENST00000502928 141 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AC111000.2-201ENST00000507775 550 ntBASIC4.4□□□□□ -1.71
CDH12P55289 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH12P55289 AC021146.3-201ENST00000511911 260 ntBASIC4.4□□□□□ -1.71
CDH12P55289 OR5BM1P-201ENST00000512021 366 ntBASIC4.4□□□□□ -1.71
CDH12P55289 RN7SKP31-201ENST00000516354 278 ntBASIC4.4□□□□□ -1.71
CDH12P55289 RNU6-885P-201ENST00000516607 104 ntBASIC4.4□□□□□ -1.71
CDH12P55289 RN7SKP147-201ENST00000517154 244 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH12P55289 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH12P55289 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH12P55289 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH12P55289 HAUS8P1-201ENST00000549005 542 ntBASIC4.4□□□□□ -1.71
CDH12P55289 RPL21P7-201ENST00000557463 483 ntBASIC4.4□□□□□ -1.71
CDH12P55289 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH12P55289 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH12P55289 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH12P55289 ATP5J2P6-201ENST00000565203 266 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AC090616.2-202ENST00000584248 222 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH12P55289 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.4□□□□□ -1.71
CDH12P55289 VN1R90P-201ENST00000595717 726 ntBASIC4.4□□□□□ -1.71
CDH12P55289 VN1R82P-201ENST00000601481 356 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AC124312.4-201ENST00000605533 310 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AL121932.1-201ENST00000605542 214 ntBASIC4.4□□□□□ -1.71
CDH12P55289 EIF3FP1-201ENST00000613970 806 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AC140113.4-201ENST00000622087 222 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AC073348.1-201ENST00000623002 331 ntBASIC4.4□□□□□ -1.71
CDH12P55289 AC116563.2-201ENST00000624751 535 ntBASIC4.4□□□□□ -1.71
CDH12P55289 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH12P55289 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH12P55289 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CDH12P55289 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH12P55289 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH12P55289 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH12P55289 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH12P55289 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH12P55289 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH12P55289 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.4□□□□□ -1.71
CDH12P55289 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH12P55289 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CDH12P55289 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH12P55289 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH12P55289 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH12P55289 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH12P55289 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH12P55289 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CDH12P55289 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH12P55289 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH12P55289 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH12P55289 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.39□□□□□ -1.71
CDH12P55289 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH12P55289 TLK1P1-201ENST00000456760 2440 ntBASIC4.39□□□□□ -1.71
CDH12P55289 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CDH12P55289 RNU6-582P-201ENST00000362989 107 ntBASIC4.39□□□□□ -1.71
CDH12P55289 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH12P55289 BMS1P3-201ENST00000372011 932 ntBASIC4.39□□□□□ -1.71
CDH12P55289 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH12P55289 SNORA51.12-201ENST00000384448 134 ntBASIC4.39□□□□□ -1.71
CDH12P55289 TAF9BP1-201ENST00000396646 746 ntBASIC4.39□□□□□ -1.71
CDH12P55289 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH12P55289 P2RY10P2-201ENST00000416730 913 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AC234782.4-201ENST00000417646 1048 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AC093414.1-201ENST00000434712 514 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH12P55289 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH12P55289 AL117351.1-201ENST00000438864 766 ntBASIC4.39□□□□□ -1.71
CDH12P55289 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH12P55289 MTCYBP34-201ENST00000439552 670 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AC118469.1-201ENST00000442943 488 ntBASIC4.39□□□□□ -1.71
CDH12P55289 RAB11AP1-201ENST00000442978 646 ntBASIC4.39□□□□□ -1.71
CDH12P55289 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH12P55289 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH12P55289 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH12P55289 AC073387.1-201ENST00000453261 709 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AC005008.1-201ENST00000456151 612 ntBASIC4.39□□□□□ -1.71
CDH12P55289 CCDC75P1-201ENST00000469247 791 ntBASIC4.39□□□□□ -1.71
CDH12P55289 BZW1P2-201ENST00000473537 826 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AC109462.1-201ENST00000491087 368 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH12P55289 HSPE1P23-201ENST00000509838 286 ntBASIC4.39□□□□□ -1.71
CDH12P55289 MTND1P22-201ENST00000510572 951 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AC109445.1-201ENST00000512356 383 ntBASIC4.39□□□□□ -1.71
CDH12P55289 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH12P55289 RNA5SP34-201ENST00000516887 130 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH12P55289 MTCO1P49-201ENST00000523429 802 ntBASIC4.39□□□□□ -1.71
CDH12P55289 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.39□□□□□ -1.71
CDH12P55289 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH12P55289 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.39□□□□□ -1.71
CDH12P55289 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH12P55289 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH12P55289 GTF2IP8-201ENST00000560687 584 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.39□□□□□ -1.71
CDH12P55289 AC146944.4-201ENST00000602697 718 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AC023813.4-201ENST00000607580 580 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AP001521.2-201ENST00000608772 546 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AL121612.2-201ENST00000612261 482 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms